About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07204-
Paelopatides07205-
Paelopatides07206-
Paelopatides07207SPORE COAT PROTEIN SP85
Paelopatides07208DNAJ HOMOLOG SUBFAMILY C MEMBER
Paelopatides07209-
Paelopatides07210PROTEIN CBG16428
Paelopatides07211-
Paelopatides07212CARBOHYDRATE SULFOTRANSFERASE
Paelopatides07213-
Paelopatides07214-
Paelopatides07215ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Paelopatides07216-
Paelopatides07217-
Paelopatides07218ZINC FINGER PROTEIN
Paelopatides07219GLUTAMINE SYNTHETASE
Paelopatides07220GLUTAMINE SYNTHETASE
Paelopatides07221PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides07222FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07223FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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