About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07184UNCHARACTERIZED
Paelopatides07185REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07186UNCHARACTERIZED
Paelopatides0718739S RIBOSOMAL PROTEIN L35, MITOCHONDRIAL
Paelopatides07188-
Paelopatides07189PBS LYASE HEAT-LIKE PROTEIN
Paelopatides07190-
Paelopatides07191DOPEY-RELATED
Paelopatides07192DOPEY-RELATED
Paelopatides07193-
Paelopatides07194-
Paelopatides07195DOPEY-RELATED
Paelopatides07196-
Paelopatides07197-
Paelopatides07198PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides07199GLUTAMINE SYNTHETASE
Paelopatides07200-
Paelopatides07201PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides07202S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides07203-
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