About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s046.g0126.t1
Lsat_s046.g0127.t1
Lsat_s046.g0128.t1
Lsat_s046.g0129.t1
Lsat_s046.g0130.t1
Lsat_s046.g0131.t1CYSTEINE DESULFURYLASE FAMILY MEMBER
Lsat_s046.g0132.t1FORKHEAD BOX PROTEIN
Lsat_s046.g0133.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s046.g0134.t1RAB GDP/GTP EXCHANGE FACTOR
Lsat_s046.g0135.t1LD33804P
Lsat_s046.g0136.t1UNCHARACTERIZED
Lsat_s046.g0137.t1NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3
Lsat_s046.g0138.t1ATROPHIN-RELATED
Lsat_s046.g0139.t1
Lsat_s046.g0140.t1MIP08469P
Lsat_s046.g0141.t1
Lsat_s046.g0142.t1
Lsat_s046.g0143.t1TRANSMEMBRANE GTPASE FZO1
Lsat_s046.g0144.t1FORKHEAD BOX PROTEIN J2 FAMILY MEMBER
Lsat_s046.g0145.t1MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
Lsat_s046.g0146.t1
Lsat_s046.g0147.t1DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED
Lsat_s046.g0148.t1CAVEOLIN
Lsat_s046.g0149.t1ACID PHOSPHATASE-RELATED
Lsat_s046.g0150.t1MITOCHONDRIAL CARRIER PROTEIN RIM2
Lsat_s046.g0151.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s046.g0152.t1
Lsat_s046.g0153.t1CRUMBS FAMILY MEMBER
Lsat_s046.g0154.t1CHITIN BINDING PERITROPHIN-A
Lsat_s046.g0155.t1CENTROSOMAL PROTEIN CEP135
Lsat_s046.g0156.t1
Lsat_s046.g0157.t1
Lsat_s046.g0158.t1
Lsat_s046.g0159.t1ATP-DEPENDENT RNA HELICASE
Lsat_s046.g0160.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s046.g0161.t1
Lsat_s046.g0162.t1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Lsat_s046.g0163.t1
Lsat_s046.g0164.t1
Lsat_s046.g0165.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Lsat_s046.g0166.t1PSEUDOURIDYLATE SYNTHASE
Lsat_s046.g0167.t1-
Lsat_s046.g0168.t1
Lsat_s046.g0169.t1
Lsat_s046.g0170.t1
Lsat_s046.g0171.t1METABOTROPIC GLUTAMATE RECEPTOR
Lsat_s046.g0172.t1
Lsat_s046.g0173.t1
Lsat_s046.g0174.t1
Lsat_s046.g0175.t1ZINC FINGER HOMEOBOX PROTEIN
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