About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s046.g0226.t1
Lsat_s046.g0227.t1
Lsat_s046.g0228.t1
Lsat_s046.g0229.t1
Lsat_s046.g0230.t1
Lsat_s046.g0231.t1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Lsat_s046.g0232.t1
Lsat_s046.g0233.t1
Lsat_s046.g0234.t1
Lsat_s046.g0235.t1
Lsat_s046.g0236.t1
Lsat_s046.g0237.t1
Lsat_s046.g0238.t1
Lsat_s046.g0239.t1UNCHARACTERIZED
Lsat_s046.g0240.t1UNCHARACTERIZED
Lsat_s046.g0241.t1
Lsat_s046.g0242.t1
Lsat_s046.g0243.t1
Lsat_s046.g0244.t1
Lsat_s046.g0245.t1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Lsat_s046.g0246.t1
Lsat_s046.g0247.t1
Lsat_s046.g0248.t1
Lsat_s046.g0249.t1
Lsat_s046.g0250.t1
Lsat_s046.g0251.t1
Lsat_s046.g0252.t1
Lsat_s046.g0253.t1
Lsat_s046.g0254.t1
Lsat_s046.g0255.t1
Lsat_s046.g0256.t1TAX1 BINDING PROTEIN-RELATED
Lsat_s046.g0257.t1UNCHARACTERIZED
Lsat_s046.g0258.t1ACTIN BUNDLING/MISSING IN METASTASIS-RELATED
Lsat_s046.g0259.t1ELONGATOR COMPLEX PROTEIN 5
Lsat_s046.g0260.t1
Lsat_s046.g0261.t1WD REPEAT-CONTAINING PROTEIN 97
Lsat_s046.g0262.t1
Lsat_s046.g0263.t1CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Lsat_s046.g0264.t1EF-HAND DOMAIN-CONTAINING PROTEIN D
Lsat_s046.g0265.t1CUBILIN-LIKE PROTEIN
Lsat_s046.g0266.t1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN
Lsat_s046.g0267.t1NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN
Lsat_s046.g0268.t1
Lsat_s046.g0269.t1CENTROBIN
Lsat_s046.g0270.t1UNCHARACTERIZED
Lsat_s047.g0001.t1
Lsat_s047.g0002.t1
Lsat_s047.g0003.t1PROTHORACICOTROPIC HORMONE, ISOFORM F
Lsat_s047.g0004.t1BLOM7
Lsat_s047.g0005.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 171
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