Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s047.g0006.t1 | PEPTIDE N-GLYCANASE PNGASE -RELATED |
Lsat_s047.g0007.t1 | |
Lsat_s047.g0008.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s047.g0009.t1 | AGAP008005-PA |
Lsat_s047.g0010.t1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29 |
Lsat_s047.g0011.t1 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
Lsat_s047.g0012.t1 | |
Lsat_s047.g0013.t1 | UNCHARACTERIZED |
Lsat_s047.g0014.t1 | |
Lsat_s047.g0015.t1 | PROTEIN UNC-13 HOMOLOG |
Lsat_s047.g0016.t1 | SKI ONCOGENE-RELATED |
Lsat_s047.g0017.t1 | |
Lsat_s047.g0018.t1 | LEUCOKININ RECEPTOR-RELATED |
Lsat_s047.g0019.t1 | |
Lsat_s047.g0020.t1 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
Lsat_s047.g0021.t1 | NEUROPEPTIDE Y RECEPTOR |
Lsat_s047.g0022.t1 | |
Lsat_s047.g0023.t1 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
Lsat_s047.g0024.t1 | |
Lsat_s047.g0025.t1 | |
Lsat_s047.g0026.t1 | |
Lsat_s047.g0027.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s047.g0028.t1 | |
Lsat_s047.g0029.t1 | SKI ONCOGENE-RELATED |
Lsat_s047.g0030.t1 | IP19862P |
Lsat_s047.g0031.t1 | 4.1 G PROTEIN |
Lsat_s047.g0032.t1 | GLUCONOKINASE-RELATED |
Lsat_s047.g0033.t1 | |
Lsat_s047.g0034.t1 | |
Lsat_s047.g0035.t1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Lsat_s047.g0036.t1 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
Lsat_s047.g0037.t1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Lsat_s047.g0038.t1 | |
Lsat_s047.g0039.t1 | SIMILAR TO KIAA0825 PROTEIN |
Lsat_s047.g0040.t1 | EXPRESSED PROTEIN |
Lsat_s047.g0041.t1 | |
Lsat_s047.g0042.t1 | ARGININE OR CREATINE KINASE |
Lsat_s047.g0043.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Lsat_s047.g0044.t1 | |
Lsat_s047.g0045.t1 | TYROSINE-PROTEIN KINASE |
Lsat_s047.g0046.t1 | LUPUS LA PROTEIN-RELATED |
Lsat_s047.g0047.t1 | FRATAXIN |
Lsat_s047.g0048.t1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Lsat_s047.g0049.t1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
Lsat_s047.g0050.t1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
Lsat_s047.g0051.t1 | F20B24.22 |
Lsat_s047.g0052.t1 | ELECTRON TRANSFER FLAVOPROTEIN ALPHA |
Lsat_s047.g0053.t1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Lsat_s047.g0054.t1 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN |
Lsat_s047.g0055.t1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 |