About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08935EXPRESSED PROTEIN
Paelopatides08936-
Paelopatides08937REVERSE TRANSCRIPTASE
Paelopatides08938-
Paelopatides08939REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08940-
Paelopatides08941ETS
Paelopatides08942-
Paelopatides08943PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides08944ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides08945ENZYMATIC POLYPROTEIN-RELATED
Paelopatides08947INHIBITOR OF APOPTOSIS
Paelopatides08948-
Paelopatides08949INHIBITOR OF APOPTOSIS
Paelopatides08950PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides08951RING FINGER PROTEIN 31-RELATED
Paelopatides08952ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides08955-
Paelopatides08956-
Paelopatides08957-
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