About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08809REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08810TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides08811TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides08812-
Paelopatides08813SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
Paelopatides08814NITRILASE-RELATED
Paelopatides08815OS05G0300700 PROTEIN
Paelopatides08816-
Paelopatides08817-
Paelopatides08818WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER
Paelopatides08819REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08820-
Paelopatides08821APOLIPOPROTEIN L
Paelopatides088225-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides08823-
Paelopatides08824ACYL-COA DEHYDROGENASE
Paelopatides08825-
Paelopatides08826-
Paelopatides0882760S RIBOSOMAL PROTEIN L18A
Paelopatides08828CXC DOMAIN-CONTAINING PROTEIN-RELATED
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