About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 417 418 419 420 421 422 423 424 425 426 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides08849DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides08850FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides08851BUCENTAUR RELATED
Paelopatides08852ENDONUCLEASE-RELATED
Paelopatides08853PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides08854PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides08856HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides08857ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides08858RETROTRANSPOSON
Paelopatides08859RETROTRANSPOSON
Paelopatides08860E3 UBIQUITIN-PROTEIN LIGASE TRIM
Paelopatides08861-
Paelopatides08862ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides08863CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Paelopatides08864-
Paelopatides08865TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides08866PROTEIN CBG26694
Paelopatides08867GAG-RELATED PROTEIN
Paelopatides08868CARBOHYDRATE SULFOTRANSFERASE
Paelopatides08869CXC DOMAIN-CONTAINING PROTEIN-RELATED
TOP