Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000021602.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| ENSZWYP00000021603.1 | |
| ENSZWYP00000021604.1 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| ENSZWYP00000021605.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| ENSZWYP00000021606.1 | RING ZINC FINGER PROTEIN |
| ENSZWYP00000021607.1 | |
| ENSZWYP00000021608.1 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
| ENSZWYP00000021609.1 | RHO FAMILY GTPASE |
| ENSZWYP00000021610.1 | SIDEROFLEXIN |
| ENSZWYP00000021611.1 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
| ENSZWYP00000021612.1 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
| ENSZWYP00000021613.1 | GUANYLYL CYCLASE |
| ENSZWYP00000021614.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| ENSZWYP00000021615.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2D |
| ENSZWYP00000021616.1 | LYSINE-SPECIFIC DEMETHYLASE |
| ENSZWYP00000021617.1 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
| ENSZWYP00000021618.1 | |
| ENSZWYP00000021619.1 | |
| ENSZWYP00000021620.1 | RHO FAMILY GTPASE |
| ENSZWYP00000021621.1 | |
| ENSZWYP00000021622.1 | |
| ENSZWYP00000021623.1 | |
| ENSZWYP00000021624.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| ENSZWYP00000021625.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| ENSZWYP00000021626.1 | RING-TYPE DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000021627.1 | NARDILYSIN |
| ENSZWYP00000021628.1 | ALPHA-L-FUCOSIDASE |
| ENSZWYP00000021629.1 | |
| ENSZWYP00000021630.1 | |
| ENSZWYP00000021631.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| ENSZWYP00000021632.1 | EXPORTIN 4,7-RELATED |
| ENSZWYP00000021633.1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| ENSZWYP00000021634.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| ENSZWYP00000021635.1 | |
| ENSZWYP00000021636.1 | |
| ENSZWYP00000021637.1 | |
| ENSZWYP00000021638.1 | KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED |
| ENSZWYP00000021639.1 | |
| ENSZWYP00000021640.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| ENSZWYP00000021641.1 | |
| ENSZWYP00000021642.1 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
| ENSZWYP00000021643.1 | OS01G0585100 PROTEIN |
| ENSZWYP00000021644.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| ENSZWYP00000021645.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| ENSZWYP00000021646.1 | 3'-5' EXONUCLEASE ERI1-RELATED |
| ENSZWYP00000021647.1 | |
| ENSZWYP00000021648.1 | |
| ENSZWYP00000021649.1 | |
| ENSZWYP00000021650.1 | THIOREDOXIN-LIKE PROTEIN 1 |
| ENSZWYP00000021651.1 |
