About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09275EPM2A-INTERACTING PROTEIN 1
Paelopatides09276-
Paelopatides09277PROTEIN CBG26694
Paelopatides09278PARANEOPLASTIC ANTIGEN
Paelopatides09279-
Paelopatides09280-
Paelopatides09281-
Paelopatides09282-
Paelopatides09283CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09284AGAP008170-PA
Paelopatides09285TRANSPOSABLE ELEMENT-RELATED
Paelopatides09286SERINE/THREONINE-PROTEIN KINASE PIM
Paelopatides09287REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09288BUCENTAUR RELATED
Paelopatides09289-
Paelopatides09290OTU DOMAIN CONTAINING PROTEIN
Paelopatides09291LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73
Paelopatides09292UPF0147 PROTEIN MJ1419
Paelopatides09293-
Paelopatides09294-
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