About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09191FUKUTIN-RELATED
Paelopatides09192FUKUTIN-RELATED
Paelopatides09193-
Paelopatides09194-
Paelopatides09195SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09196SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09197SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09198CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09199TESMIN/TSO1-RELATED
Paelopatides09200CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09201-
Paelopatides09202BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides09203CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09204-
Paelopatides09205-
Paelopatides09206CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09207-
Paelopatides09208-
Paelopatides09209NETRIN RECEPTOR UNC5
Paelopatides09210PROTEIN CBG26694
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