About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09295-
Paelopatides09296-
Paelopatides09297-
Paelopatides09298-
Paelopatides09299ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides09300UNCHARACTERIZED
Paelopatides09301CT120 PROTEIN
Paelopatides09302-
Paelopatides09303LAMGL DOMAIN-CONTAINING PROTEIN
Paelopatides09304ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides09305ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides09306-
Paelopatides09307-
Paelopatides09308GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides09309-
Paelopatides09310-
Paelopatides09311TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN 4
Paelopatides09312UBIQUITIN-ACTIVATING ENZYME E1
Paelopatides09313EPM2A-INTERACTING PROTEIN 1
Paelopatides09314PROTEIN GAMETE EXPRESSED 1
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