About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09149PROTEIN CBG26694
Paelopatides09150-
Paelopatides09151REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09152EPM2A-INTERACTING PROTEIN 1
Paelopatides09153EPM2A-INTERACTING PROTEIN 1
Paelopatides09154-
Paelopatides09155PROTEIN CBG26694
Paelopatides09156-
Paelopatides09157REVERSE TRANSCRIPTASES
Paelopatides09158-
Paelopatides09159SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides09160UNCHARACTERIZED
Paelopatides09161F-BOX ONLY PROTEIN 33
Paelopatides09162-
Paelopatides09163CHROMOBOX PROTEIN
Paelopatides09164-
Paelopatides09165PROTEIN CBG26694
Paelopatides09166-
Paelopatides09167-
Paelopatides09168PROTEIN CBG26694
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