About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s065.g0110.t1-
Lsat_s065.g0111.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s065.g0112.t1CCR4 NOT-RELATED
Lsat_s065.g0113.t1BESTROPHIN
Lsat_s065.g0114.t1
Lsat_s065.g0115.t1
Lsat_s065.g0116.t1DUMPY: SHORTER THAN WILD-TYPE
Lsat_s065.g0117.t1
Lsat_s065.g0118.t1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
Lsat_s065.g0119.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s065.g0120.t1FORKHEAD BOX PROTEIN O
Lsat_s065.g0121.t1
Lsat_s065.g0122.t1
Lsat_s065.g0123.t1TESTIS-EXPRESSED PROTEIN 11
Lsat_s065.g0124.t1
Lsat_s065.g0125.t1E3 UFM1-PROTEIN LIGASE 1
Lsat_s065.g0126.t1
Lsat_s065.g0127.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Lsat_s066.g0001.t1
Lsat_s066.g0002.t1IRE1-RELATED
Lsat_s066.g0003.t1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Lsat_s066.g0004.t1
Lsat_s066.g0005.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s066.g0006.t1
Lsat_s066.g0007.t1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Lsat_s066.g0008.t1
Lsat_s066.g0009.t1
Lsat_s066.g0010.t1-
Lsat_s066.g0011.t1
Lsat_s066.g0012.t1
Lsat_s066.g0013.t1IRE1-RELATED
Lsat_s066.g0014.t1
Lsat_s066.g0015.t1
Lsat_s066.g0016.t1
Lsat_s066.g0017.t1
Lsat_s066.g0018.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s066.g0019.t1
Lsat_s066.g0020.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s066.g0021.t1-
Lsat_s066.g0022.t1
Lsat_s066.g0023.t14.1 G PROTEIN
Lsat_s066.g0024.t1UNCHARACTERIZED
Lsat_s066.g0025.t1TYROSINE-PROTEIN PHOSPHATASE
Lsat_s066.g0026.t1
Lsat_s066.g0027.t1UNCHARACTERIZED
Lsat_s066.g0028.t1
Lsat_s066.g0029.t1
Lsat_s066.g0030.t1
Lsat_s066.g0031.t1
Lsat_s066.g0032.t1
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