About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s064.g0135.t1
Lsat_s064.g0136.t1
Lsat_s064.g0137.t1HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Lsat_s064.g0138.t1RAD52 MOTIF-CONTAINING PROTEIN 1
Lsat_s064.g0139.t1
Lsat_s064.g0140.t1RAD52 MOTIF-CONTAINING PROTEIN 1
Lsat_s064.g0141.t1RIKEN CDNA D130052B06 GENE
Lsat_s064.g0142.t1UNCHARACTERIZED
Lsat_s064.g0143.t1-
Lsat_s064.g0144.t1UNCHARACTERIZED
Lsat_s064.g0145.t1-
Lsat_s064.g0146.t1
Lsat_s064.g0147.t1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Lsat_s064.g0148.t1PROTEIN CBG05131
Lsat_s064.g0149.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s064.g0150.t1
Lsat_s064.g0151.t1
Lsat_s064.g0152.t1
Lsat_s064.g0153.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s064.g0154.t1
Lsat_s064.g0155.t1
Lsat_s064.g0156.t1MORN REPEAT-CONTAINING PROTEIN 2
Lsat_s064.g0157.t1DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
Lsat_s064.g0158.t1PRE-MRNA SPLICING FACTOR
Lsat_s064.g0159.t1
Lsat_s064.g0160.t1
Lsat_s064.g0161.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s064.g0162.t1DESTABILASE-RELATED
Lsat_s064.g0163.t1DESTABILASE-RELATED
Lsat_s064.g0164.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s064.g0165.t1
Lsat_s064.g0166.t1
Lsat_s064.g0167.t1
Lsat_s064.g0168.t1
Lsat_s064.g0169.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s064.g0170.t1ANGIOMOTIN
Lsat_s064.g0171.t1
Lsat_s064.g0172.t1N-LYSINE METHYLTRANSFERASE KMT5A
Lsat_s064.g0173.t1
Lsat_s064.g0174.t1
Lsat_s064.g0175.t1
Lsat_s065.g0001.t1MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
Lsat_s065.g0002.t1WD40 REPEAT PROTEIN
Lsat_s065.g0003.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s065.g0004.t1UNCHARACTERIZED
Lsat_s065.g0005.t1COLLAGEN ALPHA
Lsat_s065.g0006.t1
Lsat_s065.g0007.t1
Lsat_s065.g0008.t1
Lsat_s065.g0009.t1
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