Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s071.g0122.t1 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Lsat_s071.g0123.t1 | LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE |
Lsat_s071.g0124.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
Lsat_s071.g0125.t1 | ALANYL-TRNA EDITING PROTEIN |
Lsat_s071.g0126.t1 | DESTABILASE-RELATED |
Lsat_s071.g0127.t1 | DESTABILASE-RELATED |
Lsat_s071.g0128.t1 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Lsat_s071.g0129.t1 | ORIGIN RECOGNITION COMPLEX SUBUNIT 2 |
Lsat_s071.g0130.t1 | UNCHARACTERIZED |
Lsat_s071.g0131.t1 | |
Lsat_s071.g0132.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s071.g0133.t1 | |
Lsat_s071.g0134.t1 | |
Lsat_s072.g0001.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s072.g0002.t1 | PROTEIN DIAPHANOUS |
Lsat_s072.g0003.t1 | |
Lsat_s072.g0004.t1 | |
Lsat_s072.g0005.t1 | |
Lsat_s072.g0006.t1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Lsat_s072.g0007.t1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Lsat_s072.g0008.t1 | |
Lsat_s072.g0009.t1 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
Lsat_s072.g0010.t1 | |
Lsat_s072.g0011.t1 | |
Lsat_s072.g0012.t1 | |
Lsat_s072.g0013.t1 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
Lsat_s072.g0014.t1 | PHD/F-BOX CONTAINING PROTEIN |
Lsat_s072.g0015.t1 | |
Lsat_s072.g0016.t1 | |
Lsat_s072.g0017.t1 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Lsat_s072.g0018.t1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE O |
Lsat_s072.g0019.t1 | |
Lsat_s072.g0020.t1 | |
Lsat_s072.g0021.t1 | CYTOKINE RECEPTOR |
Lsat_s072.g0022.t1 | |
Lsat_s072.g0023.t1 | |
Lsat_s072.g0024.t1 | |
Lsat_s072.g0025.t1 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Lsat_s072.g0026.t1 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Lsat_s072.g0027.t1 | P2X PURINOCEPTOR |
Lsat_s072.g0028.t1 | HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATED |
Lsat_s072.g0029.t1 | UNC-13-4A, ISOFORM B |
Lsat_s072.g0030.t1 | RUS1 FAMILY PROTEIN C16ORF58 |
Lsat_s072.g0031.t1 | |
Lsat_s072.g0032.t1 | RUS1 FAMILY PROTEIN C16ORF58 |
Lsat_s072.g0033.t1 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Lsat_s072.g0034.t1 | |
Lsat_s072.g0035.t1 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Lsat_s072.g0036.t1 | |
Lsat_s072.g0037.t1 | PROTEIN CBG10425 |