About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s071.g0122.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s071.g0123.t1LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE
Lsat_s071.g0124.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
Lsat_s071.g0125.t1ALANYL-TRNA EDITING PROTEIN
Lsat_s071.g0126.t1DESTABILASE-RELATED
Lsat_s071.g0127.t1DESTABILASE-RELATED
Lsat_s071.g0128.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s071.g0129.t1ORIGIN RECOGNITION COMPLEX SUBUNIT 2
Lsat_s071.g0130.t1UNCHARACTERIZED
Lsat_s071.g0131.t1
Lsat_s071.g0132.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s071.g0133.t1
Lsat_s071.g0134.t1
Lsat_s072.g0001.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s072.g0002.t1PROTEIN DIAPHANOUS
Lsat_s072.g0003.t1
Lsat_s072.g0004.t1
Lsat_s072.g0005.t1
Lsat_s072.g0006.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s072.g0007.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s072.g0008.t1
Lsat_s072.g0009.t1PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Lsat_s072.g0010.t1
Lsat_s072.g0011.t1
Lsat_s072.g0012.t1
Lsat_s072.g0013.t1CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1
Lsat_s072.g0014.t1PHD/F-BOX CONTAINING PROTEIN
Lsat_s072.g0015.t1
Lsat_s072.g0016.t1
Lsat_s072.g0017.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s072.g0018.t1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE O
Lsat_s072.g0019.t1
Lsat_s072.g0020.t1
Lsat_s072.g0021.t1CYTOKINE RECEPTOR
Lsat_s072.g0022.t1
Lsat_s072.g0023.t1
Lsat_s072.g0024.t1
Lsat_s072.g0025.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s072.g0026.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s072.g0027.t1P2X PURINOCEPTOR
Lsat_s072.g0028.t1HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATED
Lsat_s072.g0029.t1UNC-13-4A, ISOFORM B
Lsat_s072.g0030.t1RUS1 FAMILY PROTEIN C16ORF58
Lsat_s072.g0031.t1
Lsat_s072.g0032.t1RUS1 FAMILY PROTEIN C16ORF58
Lsat_s072.g0033.t1RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Lsat_s072.g0034.t1
Lsat_s072.g0035.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s072.g0036.t1
Lsat_s072.g0037.t1PROTEIN CBG10425
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