About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s071.g0022.t1
Lsat_s071.g0023.t1
Lsat_s071.g0024.t1
Lsat_s071.g0025.t1
Lsat_s071.g0026.t1HOMEOBOX PROTEIN ENGRAILED
Lsat_s071.g0027.t1
Lsat_s071.g0028.t1
Lsat_s071.g0029.t1PHD FINGER PROTEIN
Lsat_s071.g0030.t1
Lsat_s071.g0031.t1PHD FINGER PROTEINS
Lsat_s071.g0032.t1
Lsat_s071.g0033.t1
Lsat_s071.g0034.t1NADH-UBIQUINONE OXIDOREDUCTASE MLRQ SUBUNIT
Lsat_s071.g0035.t1
Lsat_s071.g0036.t1
Lsat_s071.g0037.t1
Lsat_s071.g0038.t1
Lsat_s071.g0039.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s071.g0040.t1
Lsat_s071.g0041.t1FIBRILLIN-RELATED
Lsat_s071.g0042.t1STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE
Lsat_s071.g0043.t1UBX DOMAIN-CONTAINING PROTEIN 4
Lsat_s071.g0044.t1PROTEIN CBG18333
Lsat_s071.g0045.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s071.g0046.t1
Lsat_s071.g0047.t1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
Lsat_s071.g0048.t1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Lsat_s071.g0049.t1
Lsat_s071.g0050.t1
Lsat_s071.g0051.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s071.g0052.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s071.g0053.t1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Lsat_s071.g0054.t1GUANYLYL CYCLASE
Lsat_s071.g0055.t1GUANYLYL CYCLASE
Lsat_s071.g0056.t1GUANYLYL CYCLASE
Lsat_s071.g0057.t1GUANYLYL CYCLASE
Lsat_s071.g0058.t1
Lsat_s071.g0059.t1METHIONINE AMINOPEPTIDASE
Lsat_s071.g0060.t1SERINE HYDROLASE RBBP9
Lsat_s071.g0061.t1RETINOL DEHYDROGENASE
Lsat_s071.g0062.t1
Lsat_s071.g0063.t1
Lsat_s071.g0064.t1MULTICOPPER OXIDASE-RELATED
Lsat_s071.g0065.t1
Lsat_s071.g0066.t1HOMEOBOX PROTEIN MOX
Lsat_s071.g0067.t1
Lsat_s071.g0068.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s071.g0069.t1POL PROTEIN
Lsat_s071.g0070.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s071.g0071.t1
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