About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s070.g0114.t1EPITHELIAL MEMBRANE PROTEIN-RELATED
Lsat_s070.g0115.t1DOCKING PROTEIN RELATED
Lsat_s070.g0116.t1REGULATOR COMPLEX PROTEIN LAMTOR3
Lsat_s070.g0117.t1
Lsat_s070.g0118.t1RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1
Lsat_s070.g0119.t1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
Lsat_s070.g0120.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s070.g0121.t1
Lsat_s070.g0122.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s070.g0123.t1
Lsat_s070.g0124.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s070.g0125.t1
Lsat_s070.g0126.t1AMINO ACID TRANSPORTER
Lsat_s070.g0127.t1
Lsat_s070.g0128.t1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s070.g0129.t1NEURON-DERIVED NEUROTROPHIC FACTOR
Lsat_s070.g0130.t1
Lsat_s070.g0131.t1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Lsat_s070.g0132.t1UNCHARACTERIZED
Lsat_s070.g0133.t1MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
Lsat_s070.g0134.t1PUTATIVE-RELATED
Lsat_s070.g0135.t1
Lsat_s070.g0136.t1SH3 DOMAIN-CONTAINING
Lsat_s070.g0137.t1TNF RECEPTOR ASSOCIATED FACTOR
Lsat_s070.g0138.t1ANKYRIN REPEAT PROTEIN
Lsat_s070.g0139.t1TRANSDUCIN BETA-LIKE 3
Lsat_s070.g0140.t1LD27203P-RELATED
Lsat_s070.g0141.t1
Lsat_s070.g0142.t1
Lsat_s071.g0001.t1WD REPEAT DOMAIN 60
Lsat_s071.g0002.t1
Lsat_s071.g0003.t1
Lsat_s071.g0004.t1
Lsat_s071.g0005.t1
Lsat_s071.g0006.t1SYNAPTIC VESICLE GLYCOPROTEIN 2
Lsat_s071.g0007.t1
Lsat_s071.g0008.t1SYNAPTIC VESICLE GLYCOPROTEIN 2
Lsat_s071.g0009.t1ENHANCER OF POLYCOMB
Lsat_s071.g0010.t1HOMEOBOX PROTEIN ENGRAILED
Lsat_s071.g0011.t1
Lsat_s071.g0012.t1
Lsat_s071.g0013.t1
Lsat_s071.g0014.t1
Lsat_s071.g0015.t1
Lsat_s071.g0016.t1HOMEOBOX PROTEIN ENGRAILED
Lsat_s071.g0017.t1
Lsat_s071.g0018.t1OPSIN
Lsat_s071.g0019.t1
Lsat_s071.g0020.t1
Lsat_s071.g0021.t1HOMEOBOX PROTEIN ENGRAILED
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