Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s072.g0038.t1 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Lsat_s072.g0039.t1 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Lsat_s072.g0040.t1 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Lsat_s072.g0041.t1 | INTEGRATOR COMPLEX SUBUNIT 2 |
Lsat_s072.g0042.t1 | INTEGRATOR COMPLEX SUBUNIT 2 |
Lsat_s072.g0043.t1 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
Lsat_s072.g0044.t1 | INTEGRATOR COMPLEX SUBUNIT 2 |
Lsat_s072.g0045.t1 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
Lsat_s072.g0046.t1 | FRINGE-RELATED |
Lsat_s072.g0047.t1 | |
Lsat_s072.g0048.t1 | |
Lsat_s072.g0049.t1 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
Lsat_s072.g0050.t1 | FRINGE-RELATED |
Lsat_s072.g0051.t1 | BREAKPOINT CLUSTER REGION PROTEIN BCR |
Lsat_s072.g0052.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0053.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0054.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0055.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0056.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0057.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0058.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0059.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0060.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0061.t1 | HISTIDINE AMMONIA-LYASE |
Lsat_s072.g0062.t1 | RH14732P |
Lsat_s072.g0063.t1 | TRANSDUCIN BETA-LIKE PROTEIN 2 |
Lsat_s072.g0064.t1 | MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS |
Lsat_s072.g0065.t1 | UNCHARACTERIZED |
Lsat_s072.g0066.t1 | ENDOPLASMIC RETICULUM PROTEIN ERP29 |
Lsat_s072.g0067.t1 | UNCHARACTERIZED |
Lsat_s072.g0068.t1 | |
Lsat_s072.g0069.t1 | UNCHARACTERIZED |
Lsat_s072.g0070.t1 | |
Lsat_s072.g0071.t1 | |
Lsat_s072.g0072.t1 | P2X PURINOCEPTOR |
Lsat_s072.g0073.t1 | |
Lsat_s072.g0074.t1 | |
Lsat_s072.g0075.t1 | SWAP-70 RECOMBINASE |
Lsat_s072.g0076.t1 | NYD-SP28 PROTEIN |
Lsat_s072.g0077.t1 | CELL CYCLE CHECKPOINT PROTEIN RAD1 |
Lsat_s072.g0078.t1 | UNCHARACTERIZED |
Lsat_s072.g0079.t1 | G PATCH DOMAIN CONTAINING PROTEIN 3 |
Lsat_s072.g0080.t1 | |
Lsat_s072.g0081.t1 | |
Lsat_s072.g0082.t1 | |
Lsat_s072.g0083.t1 | MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1 |
Lsat_s072.g0084.t1 | |
Lsat_s072.g0085.t1 | |
Lsat_s072.g0086.t1 | |
Lsat_s072.g0087.t1 |