About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s074.g0004.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s074.g0005.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s074.g0006.t1
Lsat_s074.g0007.t1
Lsat_s074.g0008.t1
Lsat_s074.g0009.t1
Lsat_s074.g0010.t1
Lsat_s074.g0011.t1CALPAIN-7
Lsat_s074.g0012.t1
Lsat_s074.g0013.t1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
Lsat_s074.g0014.t1LD33804P
Lsat_s074.g0015.t1TGF-BETA FAMILY
Lsat_s074.g0016.t1
Lsat_s074.g0017.t1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Lsat_s074.g0018.t1-
Lsat_s074.g0019.t1
Lsat_s074.g0020.t1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Lsat_s074.g0021.t1
Lsat_s074.g0022.t1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Lsat_s074.g0023.t1MATING RESPONSE PROTEIN POI2
Lsat_s074.g0024.t1LP04239P
Lsat_s074.g0025.t1OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Lsat_s074.g0026.t1E3 UBIQUITIN-PROTEIN LIGASE MIB2
Lsat_s074.g0027.t1E3 UBIQUITIN-PROTEIN LIGASE MIB2
Lsat_s074.g0028.t1
Lsat_s074.g0029.t1SIDESTEP PROTEIN
Lsat_s074.g0030.t1
Lsat_s074.g0031.t1
Lsat_s074.g0032.t1SI:DKEY-192D15.2-RELATED
Lsat_s074.g0033.t1
Lsat_s074.g0034.t1
Lsat_s074.g0035.t1
Lsat_s074.g0036.t1
Lsat_s074.g0037.t1
Lsat_s074.g0038.t1
Lsat_s074.g0039.t1
Lsat_s074.g0040.t1
Lsat_s074.g0041.t1ATP-BINDING CASSETTE SUB-FAMILY B
Lsat_s074.g0042.t1PYRIDOXINE-5-PHOSPHATE OXIDASE
Lsat_s074.g0043.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s074.g0044.t1
Lsat_s074.g0045.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Lsat_s074.g0046.t1CYCLIN DEPENDANT KINASE-5 ACTIVATOR
Lsat_s074.g0047.t1
Lsat_s074.g0048.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s074.g0049.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Lsat_s074.g0050.t1
Lsat_s074.g0051.t1
Lsat_s074.g0052.t1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s074.g0053.t1
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