About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s075.g0012.t1DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
Lsat_s075.g0013.t1
Lsat_s075.g0014.t1CADHERIN DOMAIN-CONTAINING PROTEIN
Lsat_s075.g0015.t1O-METHYLTRANSFERASE
Lsat_s075.g0016.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s075.g0017.t1
Lsat_s075.g0018.t1
Lsat_s075.g0019.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Lsat_s075.g0020.t1
Lsat_s075.g0021.t1
Lsat_s075.g0022.t1
Lsat_s075.g0023.t1CENTROMERE PROTEIN H
Lsat_s075.g0024.t1
Lsat_s075.g0025.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s075.g0026.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s075.g0027.t1
Lsat_s075.g0028.t1SIGNAL-TRANSDUCING ADAPTOR PROTEIN-RELATED
Lsat_s075.g0029.t1UNCHARACTERIZED
Lsat_s075.g0030.t1
Lsat_s075.g0031.t1NICALIN
Lsat_s075.g0032.t1-
Lsat_s075.g0033.t1DYNEIN INTERMEDIATE CHAIN
Lsat_s075.g0034.t1FUKUTIN RELATED PROTEIN
Lsat_s075.g0035.t1POLYAMINE-MODULATED FACTOR 1
Lsat_s075.g0036.t1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Lsat_s075.g0037.t1PHOSPHATIDYLINOSITOL KINASE
Lsat_s075.g0038.t1CELL FATE DETERMINING PROTEIN MAB21-RELATED
Lsat_s075.g0039.t1
Lsat_s075.g0040.t1FORKHEAD BOX PROTEIN
Lsat_s075.g0041.t1
Lsat_s075.g0042.t1CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1
Lsat_s075.g0043.t1PREFOLDIN SUBUNIT 4
Lsat_s075.g0044.t1
Lsat_s075.g0045.t1
Lsat_s075.g0046.t1FORKHEAD BOX PROTEIN
Lsat_s075.g0047.t1
Lsat_s075.g0048.t1
Lsat_s075.g0049.t1ARGININE OR CREATINE KINASE
Lsat_s075.g0050.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s075.g0051.t1SPERM-ASSOCIATED ANTIGEN 8
Lsat_s075.g0052.t1
Lsat_s075.g0053.t1
Lsat_s075.g0054.t1LP04239P
Lsat_s075.g0055.t1GLYCOSYLTRANSFERASE STELLO1-RELATED
Lsat_s075.g0056.t1
Lsat_s075.g0057.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s075.g0058.t1
Lsat_s075.g0059.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s075.g0060.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s075.g0061.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
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