Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s075.g0012.t1 | DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG |
Lsat_s075.g0013.t1 | |
Lsat_s075.g0014.t1 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Lsat_s075.g0015.t1 | O-METHYLTRANSFERASE |
Lsat_s075.g0016.t1 | SOLUTE CARRIER FAMILY 22 MEMBER |
Lsat_s075.g0017.t1 | |
Lsat_s075.g0018.t1 | |
Lsat_s075.g0019.t1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
Lsat_s075.g0020.t1 | |
Lsat_s075.g0021.t1 | |
Lsat_s075.g0022.t1 | |
Lsat_s075.g0023.t1 | CENTROMERE PROTEIN H |
Lsat_s075.g0024.t1 | |
Lsat_s075.g0025.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s075.g0026.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s075.g0027.t1 | |
Lsat_s075.g0028.t1 | SIGNAL-TRANSDUCING ADAPTOR PROTEIN-RELATED |
Lsat_s075.g0029.t1 | UNCHARACTERIZED |
Lsat_s075.g0030.t1 | |
Lsat_s075.g0031.t1 | NICALIN |
Lsat_s075.g0032.t1 | - |
Lsat_s075.g0033.t1 | DYNEIN INTERMEDIATE CHAIN |
Lsat_s075.g0034.t1 | FUKUTIN RELATED PROTEIN |
Lsat_s075.g0035.t1 | POLYAMINE-MODULATED FACTOR 1 |
Lsat_s075.g0036.t1 | LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD |
Lsat_s075.g0037.t1 | PHOSPHATIDYLINOSITOL KINASE |
Lsat_s075.g0038.t1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Lsat_s075.g0039.t1 | |
Lsat_s075.g0040.t1 | FORKHEAD BOX PROTEIN |
Lsat_s075.g0041.t1 | |
Lsat_s075.g0042.t1 | CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1 |
Lsat_s075.g0043.t1 | PREFOLDIN SUBUNIT 4 |
Lsat_s075.g0044.t1 | |
Lsat_s075.g0045.t1 | |
Lsat_s075.g0046.t1 | FORKHEAD BOX PROTEIN |
Lsat_s075.g0047.t1 | |
Lsat_s075.g0048.t1 | |
Lsat_s075.g0049.t1 | ARGININE OR CREATINE KINASE |
Lsat_s075.g0050.t1 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Lsat_s075.g0051.t1 | SPERM-ASSOCIATED ANTIGEN 8 |
Lsat_s075.g0052.t1 | |
Lsat_s075.g0053.t1 | |
Lsat_s075.g0054.t1 | LP04239P |
Lsat_s075.g0055.t1 | GLYCOSYLTRANSFERASE STELLO1-RELATED |
Lsat_s075.g0056.t1 | |
Lsat_s075.g0057.t1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Lsat_s075.g0058.t1 | |
Lsat_s075.g0059.t1 | BETA1,3-GALACTOSYLTRANSFERASE |
Lsat_s075.g0060.t1 | BETA1,3-GALACTOSYLTRANSFERASE |
Lsat_s075.g0061.t1 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |