Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s073.g0052.t1 | |
Lsat_s073.g0053.t1 | SH3-BINDING |
Lsat_s073.g0054.t1 | |
Lsat_s073.g0055.t1 | SERINE/THREONINE-PROTEIN KINASE IAL-RELATED |
Lsat_s073.g0056.t1 | |
Lsat_s073.g0057.t1 | PALMITOYLTRANSFERASE ZDHHC16 |
Lsat_s073.g0058.t1 | T-BOX PROTEIN-RELATED |
Lsat_s073.g0059.t1 | PROTEIN CBG11604 |
Lsat_s073.g0060.t1 | |
Lsat_s073.g0061.t1 | CALCIUM BINDING PROTEIN |
Lsat_s073.g0062.t1 | CALCIUM BINDING PROTEIN |
Lsat_s073.g0063.t1 | CALCIUM BINDING PROTEIN |
Lsat_s073.g0064.t1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
Lsat_s073.g0065.t1 | |
Lsat_s073.g0066.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s073.g0067.t1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
Lsat_s073.g0068.t1 | |
Lsat_s073.g0069.t1 | WD REPEAT-CONTAINING PROTEIN 11 |
Lsat_s073.g0070.t1 | LRP2-BINDING PROTEIN |
Lsat_s073.g0071.t1 | UNCHARACTERIZED |
Lsat_s073.g0072.t1 | DACTYLIN |
Lsat_s073.g0073.t1 | REGULATOR OF G-PROTEIN SIGNALING LOCO |
Lsat_s073.g0074.t1 | CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 |
Lsat_s073.g0075.t1 | MOLTING PROTEIN MLT-4 |
Lsat_s073.g0076.t1 | CHARGED MULTIVESICULAR BODY PROTEIN |
Lsat_s073.g0077.t1 | GUANYLYL CYCLASE |
Lsat_s073.g0078.t1 | GUANYLYL CYCLASE |
Lsat_s073.g0079.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s073.g0080.t1 | MUCIN-2 |
Lsat_s073.g0081.t1 | |
Lsat_s073.g0082.t1 | GUANYLYL CYCLASE |
Lsat_s073.g0083.t1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
Lsat_s073.g0084.t1 | UV-STIMULATED SCAFFOLD PROTEIN A |
Lsat_s073.g0085.t1 | BLOC-1-RELATED COMPLEX SUBUNIT 7 BORSC7 |
Lsat_s073.g0086.t1 | ALLANTOICASE |
Lsat_s073.g0087.t1 | |
Lsat_s073.g0088.t1 | ZINC FINGER PROTEIN |
Lsat_s073.g0089.t1 | C-TERMINAL-BINDING PROTEIN |
Lsat_s073.g0090.t1 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
Lsat_s073.g0091.t1 | LORICRIN |
Lsat_s073.g0092.t1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
Lsat_s073.g0093.t1 | |
Lsat_s073.g0094.t1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
Lsat_s073.g0095.t1 | |
Lsat_s073.g0096.t1 | PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER |
Lsat_s073.g0097.t1 | UNCHARACTERIZED |
Lsat_s073.g0098.t1 | UNCHARACTERIZED |
Lsat_s073.g0099.t1 | |
Lsat_s073.g0100.t1 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Lsat_s073.g0101.t1 |