About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s076.g0005.t1
Lsat_s076.g0006.t1
Lsat_s076.g0007.t1
Lsat_s076.g0008.t1
Lsat_s076.g0009.t1
Lsat_s076.g0010.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s076.g0011.t1
Lsat_s076.g0012.t1
Lsat_s076.g0013.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s076.g0014.t1
Lsat_s076.g0015.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s076.g0016.t1FIBROUS SHEATH CABYR-BINDING PROTEIN
Lsat_s076.g0017.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s076.g0018.t1
Lsat_s076.g0019.t1
Lsat_s076.g0020.t1TRANSCRIPTION FACTOR AP-2
Lsat_s076.g0021.t1
Lsat_s076.g0022.t1TRANSCRIPTION FACTOR AP-2
Lsat_s076.g0023.t1
Lsat_s076.g0024.t1
Lsat_s076.g0025.t1
Lsat_s076.g0026.t1
Lsat_s076.g0027.t1
Lsat_s076.g0028.t1
Lsat_s076.g0029.t1
Lsat_s076.g0030.t1
Lsat_s076.g0031.t1
Lsat_s076.g0032.t1
Lsat_s076.g0033.t150S RIBOSOMAL PROTEIN L15
Lsat_s076.g0034.t1AD039 HT014 THIOREDOXIN FAMILY TRP26
Lsat_s076.g0035.t1
Lsat_s076.g0036.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Lsat_s076.g0037.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Lsat_s076.g0038.t1UNCHARACTERIZED
Lsat_s076.g0039.t1
Lsat_s076.g0040.t1
Lsat_s076.g0041.t1POLYCYSTIN-1
Lsat_s076.g0042.t1TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Lsat_s076.g0043.t1PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
Lsat_s076.g0044.t1DEP DOMAIN-CONTAINING
Lsat_s076.g0045.t1OXYSTEROL-BINDING PROTEIN-RELATED
Lsat_s076.g0046.t1
Lsat_s076.g0047.t1
Lsat_s076.g0048.t1
Lsat_s076.g0049.t1
Lsat_s076.g0050.t1PROTEIN EVA-1
Lsat_s076.g0051.t1
Lsat_s076.g0052.t1
Lsat_s076.g0053.t1THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
Lsat_s076.g0054.t1SEC14 RELATED PROTEIN
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