About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s076.g0055.t1NUCLEAR HORMONE RECEPTOR HR3-RELATED
Lsat_s076.g0056.t1CENTROSOMAL PROTEIN POC5
Lsat_s076.g0057.t1
Lsat_s076.g0058.t1
Lsat_s076.g0059.t1SNF2/RAD54 HELICASE FAMILY
Lsat_s076.g0060.t1C5ORF35
Lsat_s076.g0061.t1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Lsat_s076.g0062.t1
Lsat_s076.g0063.t1
Lsat_s076.g0064.t1
Lsat_s076.g0065.t1
Lsat_s076.g0066.t1
Lsat_s076.g0067.t1
Lsat_s076.g0068.t1
Lsat_s076.g0069.t1
Lsat_s076.g0070.t1
Lsat_s076.g0071.t1
Lsat_s076.g0072.t1
Lsat_s076.g0073.t1
Lsat_s076.g0074.t1
Lsat_s076.g0075.t1
Lsat_s076.g0076.t1
Lsat_s076.g0077.t1
Lsat_s076.g0078.t1
Lsat_s076.g0079.t1
Lsat_s076.g0080.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s076.g0081.t1
Lsat_s076.g0082.t1
Lsat_s076.g0083.t1
Lsat_s076.g0084.t1
Lsat_s076.g0085.t1
Lsat_s076.g0086.t1ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2
Lsat_s076.g0087.t1
Lsat_s076.g0088.t1
Lsat_s076.g0089.t1GUANYLYL CYCLASE
Lsat_s076.g0090.t1
Lsat_s076.g0091.t1GUANYLYL CYCLASE
Lsat_s076.g0092.t1CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN
Lsat_s076.g0093.t1
Lsat_s076.g0094.t1
Lsat_s076.g0095.t1ACETYLCHOLINESTERASE
Lsat_s076.g0096.t1
Lsat_s076.g0097.t1
Lsat_s076.g0098.t1LD30288P
Lsat_s076.g0099.t1UPF0573 PROTEIN C2ORF70
Lsat_s076.g0100.t1CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
Lsat_s076.g0101.t1CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
Lsat_s076.g0102.t1VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28
Lsat_s076.g0103.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s076.g0104.t1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
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