About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s077.g0052.t1SYNAPTOGYRIN
Lsat_s077.g0053.t1ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Lsat_s077.g0054.t1SYNAPTOGYRIN
Lsat_s077.g0055.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s077.g0056.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s077.g0057.t1
Lsat_s077.g0058.t1SYNAPTOGYRIN
Lsat_s077.g0059.t1SYNAPTOGYRIN
Lsat_s077.g0060.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s077.g0061.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s077.g0062.t1
Lsat_s077.g0063.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s077.g0064.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s077.g0065.t1ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Lsat_s077.g0066.t1FORMIN HOMOLOGY 2 FAMILY MEMBER
Lsat_s077.g0067.t1DNA2/NAM7 HELICASE FAMILY
Lsat_s077.g0068.t1
Lsat_s077.g0069.t1
Lsat_s077.g0070.t1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Lsat_s077.g0071.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s077.g0072.t1
Lsat_s077.g0073.t1CALDESMON
Lsat_s077.g0074.t1
Lsat_s077.g0075.t1
Lsat_s077.g0076.t1
Lsat_s077.g0077.t1
Lsat_s077.g0078.t1RIBOSOME BIOGENESIS REGULATORY PROTEIN
Lsat_s077.g0079.t1SORTING NEXIN
Lsat_s077.g0080.t1PHOSPHOMANNOMUTASE
Lsat_s077.g0081.t1UNCHARACTERIZED
Lsat_s077.g0082.t1
Lsat_s077.g0083.t1UNCHARACTERIZED
Lsat_s077.g0084.t1UNCHARACTERIZED
Lsat_s077.g0085.t1PROTEIN NJMU-R1
Lsat_s077.g0086.t1LETHAL 2 GIANT LARVAE PROTEIN
Lsat_s077.g0087.t1SCAFFOLD ATTACHMENT FACTOR B-RELATED
Lsat_s077.g0088.t1TUBULIN EPSILON AND DELTA COMPLEX PROTEIN 2
Lsat_s077.g0089.t1GLYCINE-RICH RNA-BINDING PROTEIN RZ1A
Lsat_s077.g0090.t1TRANSMEMBRANE PROTEIN 246
Lsat_s077.g0091.t1TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER
Lsat_s077.g0092.t1EXPORTIN-6
Lsat_s077.g0093.t1
Lsat_s077.g0094.t1
Lsat_s077.g0095.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s077.g0096.t1
Lsat_s077.g0097.t1EXPORTIN-6
Lsat_s077.g0098.t1
Lsat_s077.g0099.t1
Lsat_s077.g0100.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s077.g0101.t1
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