Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s087.g0023.t1 | |
| Lsat_s087.g0024.t1 | |
| Lsat_s087.g0025.t1 | |
| Lsat_s087.g0026.t1 | |
| Lsat_s087.g0027.t1 | |
| Lsat_s087.g0028.t1 | |
| Lsat_s087.g0029.t1 | |
| Lsat_s087.g0030.t1 | |
| Lsat_s087.g0031.t1 | |
| Lsat_s087.g0032.t1 | PROTEIN CBG10425 |
| Lsat_s087.g0033.t1 | |
| Lsat_s087.g0034.t1 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| Lsat_s087.g0035.t1 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| Lsat_s087.g0036.t1 | |
| Lsat_s087.g0037.t1 | |
| Lsat_s087.g0038.t1 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| Lsat_s087.g0039.t1 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| Lsat_s087.g0040.t1 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| Lsat_s087.g0041.t1 | DED DOMAIN-CONTAINING PROTEIN |
| Lsat_s087.g0042.t1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| Lsat_s087.g0043.t1 | |
| Lsat_s087.g0044.t1 | |
| Lsat_s087.g0045.t1 | |
| Lsat_s087.g0046.t1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| Lsat_s087.g0047.t1 | RIKEN CDNA 4921504E06 GENE |
| Lsat_s087.g0048.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0049.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0050.t1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| Lsat_s087.g0051.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0052.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0053.t1 | |
| Lsat_s087.g0054.t1 | UNCHARACTERIZED |
| Lsat_s087.g0055.t1 | |
| Lsat_s087.g0056.t1 | PROTEIN EVA-1 |
| Lsat_s087.g0057.t1 | |
| Lsat_s087.g0058.t1 | |
| Lsat_s087.g0059.t1 | |
| Lsat_s087.g0060.t1 | |
| Lsat_s087.g0061.t1 | |
| Lsat_s087.g0062.t1 | OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR |
| Lsat_s087.g0063.t1 | IRE1-RELATED |
| Lsat_s087.g0064.t1 | APG9 AUTOPHAGY 9 |
| Lsat_s087.g0065.t1 | UNCHARACTERIZED |
| Lsat_s087.g0066.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0067.t1 | |
| Lsat_s087.g0068.t1 | DYNAMIN |
| Lsat_s087.g0069.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0070.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s087.g0071.t1 | AMINO ACID TRANSPORTER |
| Lsat_s087.g0072.t1 |
