About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s084.g0090.t1HOMEOBOX PROTEIN HOX
Lsat_s084.g0091.t1
Lsat_s084.g0092.t1HOMEOBOX PROTEIN ABDOMINAL-B
Lsat_s084.g0093.t1
Lsat_s084.g0094.t1
Lsat_s084.g0095.t1
Lsat_s084.g0096.t1
Lsat_s084.g0097.t1
Lsat_s084.g0098.t1
Lsat_s084.g0099.t1TRANSMEMBRANE PROTEIN 169
Lsat_s084.g0100.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s084.g0101.t1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Lsat_s084.g0102.t1GLYCOSYL HYDROLASE-RELATED
Lsat_s084.g0103.t1ZINC FINGER PROTEIN 183
Lsat_s084.g0104.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Lsat_s084.g0105.t1
Lsat_s084.g0106.t1
Lsat_s085.g0001.t1REGULATORY PROTEIN ZESTE
Lsat_s085.g0002.t1
Lsat_s085.g0003.t1UBIQUITIN LIGASE E3 ALPHA-RELATED
Lsat_s085.g0004.t1
Lsat_s085.g0005.t1UNCHARACTERIZED
Lsat_s085.g0006.t1FAT ATYPICAL CADHERIN-RELATED
Lsat_s085.g0007.t1
Lsat_s085.g0008.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s085.g0009.t1TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE
Lsat_s085.g0010.t1UNCHARACTERIZED
Lsat_s085.g0011.t1IG-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s085.g0012.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s085.g0013.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s085.g0014.t1
Lsat_s085.g0015.t1CENTROSOMAL PROTEIN 2
Lsat_s085.g0016.t1
Lsat_s085.g0017.t1
Lsat_s085.g0018.t1
Lsat_s085.g0019.t1PERICENTRIN-LIKE PROTEIN, ISOFORM F
Lsat_s085.g0020.t1
Lsat_s085.g0021.t1
Lsat_s085.g0022.t1
Lsat_s085.g0023.t1
Lsat_s085.g0024.t1
Lsat_s085.g0025.t1
Lsat_s085.g0026.t1SPORE COAT PROTEIN SP85
Lsat_s085.g0027.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s085.g0028.t1DIFFUSE PANBRONCHIOLITIS CRITICAL REGION GENE 1
Lsat_s085.g0029.t1PROTEIN YAE1 HOMOLOG
Lsat_s085.g0030.t1
Lsat_s085.g0031.t1CORDON-BLEU
Lsat_s085.g0032.t1
Lsat_s085.g0033.t1CELL CYCLE CONTROL PROTEIN CWF22-RELATED
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