About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s087.g0073.t1ATP-DEPENDENT RNA HELICASE
Lsat_s087.g0074.t1MITOCHONDRIAL FISSION PROCESS PROTEIN 1
Lsat_s087.g0075.t1BETA LACTAMASE DOMAIN
Lsat_s087.g0076.t1METHYLTRANSFERASE-RELATED
Lsat_s087.g0077.t1
Lsat_s087.g0078.t1
Lsat_s087.g0079.t1
Lsat_s087.g0080.t1
Lsat_s087.g0081.t1
Lsat_s087.g0082.t1RIIA DOMAIN-CONTAINING PROTEIN 1
Lsat_s087.g0083.t1
Lsat_s087.g0084.t1
Lsat_s087.g0085.t1
Lsat_s087.g0086.t1
Lsat_s087.g0087.t1
Lsat_s087.g0088.t1
Lsat_s087.g0089.t1
Lsat_s087.g0090.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s087.g0091.t1RIBONUCLEASE P SUBUNIT P25
Lsat_s087.g0092.t1
Lsat_s087.g0093.t1CARNITINE O-ACYLTRANSFERASE
Lsat_s087.g0094.t1
Lsat_s087.g0095.t1
Lsat_s087.g0096.t1
Lsat_s088.g0001.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s088.g0002.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s088.g0003.t1SNF5
Lsat_s088.g0004.t1NFATC2-INTERACTING PROTEIN
Lsat_s088.g0005.t1POTE ANKYRIN DOMAIN
Lsat_s088.g0006.t1SESQUIPEDALIAN
Lsat_s088.g0007.t1
Lsat_s088.g0008.t1
Lsat_s088.g0009.t1RE45066P-RELATED
Lsat_s088.g0010.t1RE45066P-RELATED
Lsat_s088.g0011.t1
Lsat_s088.g0012.t1RE45066P-RELATED
Lsat_s088.g0013.t1RE45066P-RELATED
Lsat_s088.g0014.t1CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
Lsat_s088.g0015.t1
Lsat_s088.g0016.t1POLYKETIDE SYNTHASE-RELATED
Lsat_s088.g0017.t1UNCHARACTERIZED
Lsat_s088.g0018.t1SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
Lsat_s088.g0019.t1
Lsat_s088.g0020.t1PROTEIN CBG11839-RELATED
Lsat_s088.g0021.t1SYNAPTIC ADHESION-LIKE MOLECULE SALM
Lsat_s088.g0022.t1UNCHARACTERIZED
Lsat_s088.g0023.t1UNCHARACTERIZED
Lsat_s088.g0024.t1NIPSNAP-RELATED
Lsat_s088.g0025.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s088.g0026.t1WD40 REPEAT PROTEIN
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