About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s083.g0056.t1AT29763P-RELATED
Lsat_s083.g0057.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s083.g0058.t1CENTROMERE PROTEIN E
Lsat_s083.g0059.t1
Lsat_s083.g0060.t1TIM23
Lsat_s083.g0061.t1CASPASE
Lsat_s083.g0062.t1FATTY ACID BINDING PROTEIN
Lsat_s083.g0063.t1FATTY ACID BINDING PROTEIN
Lsat_s083.g0064.t1RAS-RELATED GTP BINDING RAG/GTR YEAST
Lsat_s083.g0065.t1
Lsat_s083.g0066.t1
Lsat_s084.g0001.t1PALMITOYLTRANSFERASE
Lsat_s084.g0002.t1CRUMBS FAMILY MEMBER
Lsat_s084.g0003.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s084.g0004.t1
Lsat_s084.g0005.t1
Lsat_s084.g0006.t1
Lsat_s084.g0007.t1
Lsat_s084.g0008.t1
Lsat_s084.g0009.t1
Lsat_s084.g0010.t1
Lsat_s084.g0011.t1
Lsat_s084.g0012.t1LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s084.g0013.t1
Lsat_s084.g0014.t1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28
Lsat_s084.g0015.t1UNCHARACTERIZED
Lsat_s084.g0016.t1
Lsat_s084.g0017.t1PHOSPHATE TRANSPORTER
Lsat_s084.g0018.t1EXPRESSED PROTEIN
Lsat_s084.g0019.t1
Lsat_s084.g0020.t1FORKHEAD BOX PROTEIN
Lsat_s084.g0021.t1
Lsat_s084.g0022.t1PROTEIN SIDEKICK
Lsat_s084.g0023.t1
Lsat_s084.g0024.t1-
Lsat_s084.g0025.t1
Lsat_s084.g0026.t1
Lsat_s084.g0027.t1
Lsat_s084.g0028.t1
Lsat_s084.g0029.t1
Lsat_s084.g0030.t1SEGMENTATION PROTEIN EVEN-SKIPPED
Lsat_s084.g0031.t1HELICASE
Lsat_s084.g0032.t1
Lsat_s084.g0033.t1SERINE HYDROXYMETHYLTRANSFERASE
Lsat_s084.g0034.t1SOLUTE CARRIER FAMILY 35 MEMBER B
Lsat_s084.g0035.t1
Lsat_s084.g0036.t1
Lsat_s084.g0037.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s084.g0038.t1PROTEIN NCBP2AS2
Lsat_s084.g0039.t1
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