About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s089.g0032.t1
Lsat_s089.g0033.t1
Lsat_s089.g0034.t1
Lsat_s089.g0035.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s089.g0036.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s089.g0037.t1
Lsat_s089.g0038.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 1
Lsat_s089.g0039.t1CALCIUM BINDING PROTEINS
Lsat_s089.g0040.t1N-MYRISTOYL TRANSFERASE
Lsat_s089.g0041.t1
Lsat_s089.g0042.t1
Lsat_s089.g0043.t1
Lsat_s089.g0044.t1
Lsat_s089.g0045.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s089.g0046.t1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
Lsat_s089.g0047.t1
Lsat_s089.g0048.t1
Lsat_s089.g0049.t1
Lsat_s089.g0050.t1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
Lsat_s089.g0051.t1
Lsat_s089.g0052.t1
Lsat_s089.g0053.t1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
Lsat_s089.g0054.t1ODD-SKIPPED - RELATED
Lsat_s089.g0055.t1TUBULIN
Lsat_s089.g0056.t1PHD FINGER PROTEINS
Lsat_s089.g0057.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s089.g0058.t1LIPASE
Lsat_s089.g0059.t1
Lsat_s089.g0060.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s089.g0061.t1
Lsat_s089.g0062.t1SEC63 DOMAIN-CONTAINING
Lsat_s089.g0063.t1
Lsat_s089.g0064.t1
Lsat_s089.g0065.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s089.g0066.t1
Lsat_s089.g0067.t1
Lsat_s089.g0068.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s089.g0069.t1
Lsat_s089.g0070.t1PROTEIN EVA-1
Lsat_s089.g0071.t1
Lsat_s089.g0072.t1NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1
Lsat_s089.g0073.t13-KETOACYL-COA THIOLASE, PEROXISOMAL
Lsat_s089.g0074.t1
Lsat_s089.g0075.t1
Lsat_s089.g0076.t1RING FINGER PROTEIN 141-RELATED
Lsat_s089.g0077.t1
Lsat_s089.g0078.t1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Lsat_s089.g0079.t1
Lsat_s089.g0080.t1
Lsat_s089.g0081.t1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
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