About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s099.g0029.t1
Lsat_s099.g0030.t1
Lsat_s099.g0031.t1
Lsat_s099.g0032.t1
Lsat_s099.g0033.t1HOMEOBOX PROTEIN NKX
Lsat_s099.g0034.t1
Lsat_s099.g0035.t1
Lsat_s099.g0036.t1
Lsat_s099.g0037.t1HOMEOBOX PROTEIN NKX
Lsat_s099.g0038.t1
Lsat_s099.g0039.t1
Lsat_s099.g0040.t1
Lsat_s099.g0041.t1HELICASE
Lsat_s099.g0042.t1IP01054P
Lsat_s099.g0043.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s099.g0044.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s099.g0045.t1
Lsat_s099.g0046.t1
Lsat_s099.g0047.t1
Lsat_s099.g0048.t1TRANSCRIPTION FACTOR LBX
Lsat_s099.g0049.t1
Lsat_s099.g0050.t1
Lsat_s099.g0051.t1
Lsat_s099.g0052.t1
Lsat_s099.g0053.t1
Lsat_s099.g0054.t1TCF3 FUSION PARTNER
Lsat_s099.g0055.t1
Lsat_s099.g0056.t1
Lsat_s099.g0057.t1
Lsat_s099.g0058.t1
Lsat_s099.g0059.t1
Lsat_s099.g0060.t1ACTIN-BINDING LIM PROTEIN
Lsat_s099.g0061.t1ATP-DEPENDENT RNA AND DNA HELICASE
Lsat_s099.g0062.t1ALMS1-RELATED
Lsat_s099.g0063.t1
Lsat_s099.g0064.t1EPITHELIAL MEMBRANE PROTEIN-RELATED
Lsat_s099.g0065.t1
Lsat_s100.g0001.t1
Lsat_s100.g0002.t1
Lsat_s100.g0003.t1
Lsat_s100.g0004.t1
Lsat_s100.g0005.t1
Lsat_s100.g0006.t1
Lsat_s100.g0007.t1
Lsat_s100.g0008.t1
Lsat_s100.g0009.t1
Lsat_s100.g0010.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s100.g0011.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Lsat_s100.g0012.t1
Lsat_s100.g0013.t1
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