About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s095.g0078.t1
Lsat_s095.g0079.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s096.g0001.t1
Lsat_s096.g0002.t1
Lsat_s096.g0003.t1OSTEOCLAST-STIMULATING FACTOR 1
Lsat_s096.g0004.t1WINS1, 2 PROTEIN
Lsat_s096.g0005.t1POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
Lsat_s096.g0006.t1
Lsat_s096.g0007.t1POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
Lsat_s096.g0008.t1JITTERBUG, ISOFORM N
Lsat_s096.g0009.t1
Lsat_s096.g0010.t1
Lsat_s096.g0011.t1
Lsat_s096.g0012.t1
Lsat_s096.g0013.t1OLFACTOMEDIN-RELATED
Lsat_s096.g0014.t1GDOWN1
Lsat_s096.g0015.t1
Lsat_s096.g0016.t1
Lsat_s096.g0017.t1
Lsat_s096.g0018.t1
Lsat_s096.g0019.t1
Lsat_s096.g0020.t1METHYLTRANSFERASE
Lsat_s096.g0021.t1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Lsat_s096.g0022.t1
Lsat_s096.g0023.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s096.g0024.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s096.g0025.t1
Lsat_s096.g0026.t1
Lsat_s096.g0027.t1
Lsat_s096.g0028.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s096.g0029.t1FUKUTIN RELATED PROTEIN
Lsat_s096.g0030.t1FUKUTIN RELATED PROTEIN
Lsat_s096.g0031.t1
Lsat_s096.g0032.t1METHYLTRANSFERASE, FKBM FAMILY PROTEIN
Lsat_s096.g0033.t1
Lsat_s096.g0034.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s096.g0035.t1
Lsat_s096.g0036.t1
Lsat_s096.g0037.t1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Lsat_s096.g0038.t1METHYLTRANSFERASE
Lsat_s096.g0039.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s096.g0040.t1
Lsat_s096.g0041.t1FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
Lsat_s096.g0042.t1
Lsat_s096.g0043.t1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Lsat_s096.g0044.t1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Lsat_s096.g0045.t1
Lsat_s096.g0046.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s096.g0047.t1
Lsat_s096.g0048.t1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
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