About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s098.g0003.t1
Lsat_s098.g0004.t1
Lsat_s098.g0005.t1-
Lsat_s098.g0006.t1PATCHED-RELATED
Lsat_s098.g0007.t1
Lsat_s098.g0008.t1
Lsat_s098.g0009.t1
Lsat_s098.g0010.t1LP09875P
Lsat_s098.g0011.t1
Lsat_s098.g0012.t1RAPSYN-RELATED
Lsat_s098.g0013.t1
Lsat_s098.g0014.t1TPR REPEAT CONTAINING PROTEIN
Lsat_s098.g0015.t1NUCLEOPORIN NUP84-RELATED
Lsat_s098.g0016.t1CCAAT DISPLACEMENT PROTEIN-RELATED
Lsat_s098.g0017.t1
Lsat_s098.g0018.t1CCAAT DISPLACEMENT PROTEIN-RELATED
Lsat_s098.g0019.t1
Lsat_s098.g0020.t1A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED
Lsat_s098.g0021.t1INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG
Lsat_s098.g0022.t1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37
Lsat_s098.g0023.t1YIPPEE DOMAIN-CONTAINING PROTEIN
Lsat_s098.g0024.t1SEC14 RELATED PROTEIN
Lsat_s098.g0025.t1
Lsat_s098.g0026.t1PERIAXIN-LIKE
Lsat_s098.g0027.t1SEC14 RELATED PROTEIN
Lsat_s098.g0028.t1
Lsat_s098.g0029.t1PHOSPHATIDYLGLYCEROL PHOSPHOLIPASE C
Lsat_s098.g0030.t1MITOCHONDRIAL RIBOSOMAL PROTEIN S23
Lsat_s098.g0031.t1FOIE GRAS
Lsat_s098.g0032.t1
Lsat_s098.g0033.t1
Lsat_s098.g0034.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Lsat_s098.g0035.t1
Lsat_s098.g0036.t1PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
Lsat_s098.g0037.t1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
Lsat_s098.g0038.t1
Lsat_s098.g0039.t1
Lsat_s098.g0040.t1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
Lsat_s098.g0041.t1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
Lsat_s098.g0042.t1
Lsat_s098.g0043.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s098.g0044.t1TRANSMEMBRANE PROTEIN 237
Lsat_s098.g0045.t1TRANSMEMBRANE PROTEIN 237
Lsat_s098.g0046.t1TRANSMEMBRANE PROTEIN 237
Lsat_s098.g0047.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s098.g0048.t1
Lsat_s098.g0049.t1
Lsat_s098.g0050.t1
Lsat_s098.g0051.t1
Lsat_s098.g0052.t1
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