About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s095.g0028.t1
Lsat_s095.g0029.t1DOCKING PROTEIN RELATED
Lsat_s095.g0030.t1DOCKING PROTEIN RELATED
Lsat_s095.g0031.t1DOCKING PROTEIN RELATED
Lsat_s095.g0032.t1
Lsat_s095.g0033.t1DOCKING PROTEIN RELATED
Lsat_s095.g0034.t1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Lsat_s095.g0035.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s095.g0036.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 172
Lsat_s095.g0037.t1SUBGROUP IIII AMINOTRANSFERASE
Lsat_s095.g0038.t1SET DOMAIN PROTEINS
Lsat_s095.g0039.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s095.g0040.t1
Lsat_s095.g0041.t1
Lsat_s095.g0042.t1
Lsat_s095.g0043.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s095.g0044.t1
Lsat_s095.g0045.t1
Lsat_s095.g0046.t1LIM DOMAIN-BINDING PROTEIN
Lsat_s095.g0047.t1
Lsat_s095.g0048.t1
Lsat_s095.g0049.t1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Lsat_s095.g0050.t1GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7
Lsat_s095.g0051.t1SUCCINYL-COA LIGASE SUBUNIT ALPHA
Lsat_s095.g0052.t1PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN
Lsat_s095.g0053.t1PANTOTHENATE KINASE
Lsat_s095.g0054.t1UBIQUITIN-PROTEIN LIGASE E3C
Lsat_s095.g0055.t1EPSIN/ENT-RELATED
Lsat_s095.g0056.t1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Lsat_s095.g0057.t1YALI0E18722P
Lsat_s095.g0058.t1
Lsat_s095.g0059.t1
Lsat_s095.g0060.t1
Lsat_s095.g0061.t1
Lsat_s095.g0062.t1
Lsat_s095.g0063.t1
Lsat_s095.g0064.t1
Lsat_s095.g0065.t1
Lsat_s095.g0066.t1
Lsat_s095.g0067.t1
Lsat_s095.g0068.t1
Lsat_s095.g0069.t1
Lsat_s095.g0070.t1
Lsat_s095.g0071.t1UNCHARACTERIZED
Lsat_s095.g0072.t1MITOCHONDRIA-EATING PROTEIN-RELATED
Lsat_s095.g0073.t1DELTEX-RELATED
Lsat_s095.g0074.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s095.g0075.t1
Lsat_s095.g0076.t1
Lsat_s095.g0077.t1
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