Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s101.g0008.t1 | MACROGLOBULIN / COMPLEMENT |
Lsat_s101.g0009.t1 | |
Lsat_s101.g0010.t1 | |
Lsat_s101.g0011.t1 | PROTEIN CBG26694 |
Lsat_s101.g0012.t1 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
Lsat_s101.g0013.t1 | MACROGLOBULIN / COMPLEMENT |
Lsat_s101.g0014.t1 | MACROGLOBULIN / COMPLEMENT |
Lsat_s101.g0015.t1 | MACROGLOBULIN / COMPLEMENT |
Lsat_s101.g0016.t1 | |
Lsat_s101.g0017.t1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Lsat_s101.g0018.t1 | ADENOSINE DEAMINASE |
Lsat_s101.g0019.t1 | |
Lsat_s101.g0020.t1 | |
Lsat_s101.g0021.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s101.g0022.t1 | CENTLEIN |
Lsat_s101.g0023.t1 | DISCONNECTED-RELATED |
Lsat_s101.g0024.t1 | |
Lsat_s101.g0025.t1 | |
Lsat_s101.g0026.t1 | GLYCOPROTEIN 96-92-RELATED-RELATED |
Lsat_s101.g0027.t1 | |
Lsat_s101.g0028.t1 | CHAPERONIN |
Lsat_s101.g0029.t1 | TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT |
Lsat_s101.g0030.t1 | RABCONNECTIN-RELATED |
Lsat_s101.g0031.t1 | REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED |
Lsat_s101.g0032.t1 | 28S RIBOSOMAL PROTEIN S36, MITOCHONDRIAL |
Lsat_s101.g0033.t1 | |
Lsat_s101.g0034.t1 | |
Lsat_s102.g0001.t1 | |
Lsat_s102.g0002.t1 | |
Lsat_s102.g0003.t1 | |
Lsat_s102.g0004.t1 | |
Lsat_s102.g0005.t1 | IRE1-RELATED |
Lsat_s102.g0006.t1 | |
Lsat_s102.g0007.t1 | LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN |
Lsat_s102.g0008.t1 | PROTEIN CBG12054-RELATED |
Lsat_s102.g0009.t1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Lsat_s102.g0010.t1 | LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN |
Lsat_s102.g0011.t1 | CYTOCHROME B561-RELATED |
Lsat_s102.g0012.t1 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
Lsat_s102.g0013.t1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
Lsat_s102.g0014.t1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Lsat_s102.g0015.t1 | |
Lsat_s102.g0016.t1 | IRE1-RELATED |
Lsat_s102.g0017.t1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Lsat_s102.g0018.t1 | ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE |
Lsat_s102.g0019.t1 | CYTOCHROME C |
Lsat_s102.g0020.t1 | CYTOCHROME C |
Lsat_s102.g0021.t1 | CYTOCHROME C |
Lsat_s102.g0022.t1 | COLLAGEN ALPHA |
Lsat_s102.g0023.t1 | - |