About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s103.g0005.t1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Lsat_s103.g0006.t1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Lsat_s103.g0007.t1DNA REPAIR ENDONUCLEASE XPF
Lsat_s103.g0008.t1UNCHARACTERIZED
Lsat_s103.g0009.t1
Lsat_s103.g0010.t1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
Lsat_s103.g0011.t1COLLAGEN ALPHA
Lsat_s103.g0012.t1PROTEIN CBG10425
Lsat_s103.g0013.t1CYTOKINE RECEPTOR
Lsat_s103.g0014.t1CYTOKINE RECEPTOR
Lsat_s103.g0015.t1NADPH OXIDASE
Lsat_s103.g0016.t1NADPH OXIDASE
Lsat_s103.g0017.t1NADPH OXIDASE
Lsat_s103.g0018.t1
Lsat_s103.g0019.t1
Lsat_s103.g0020.t1NADPH OXIDASE
Lsat_s103.g0021.t1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Lsat_s103.g0022.t1
Lsat_s103.g0023.t1
Lsat_s103.g0024.t1
Lsat_s103.g0025.t1
Lsat_s103.g0026.t1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Lsat_s103.g0027.t1SOLUTE CARRIER FAMILY 13 MEMBER
Lsat_s103.g0028.t1
Lsat_s103.g0029.t1
Lsat_s103.g0030.t1
Lsat_s103.g0031.t1
Lsat_s103.g0032.t1
Lsat_s103.g0033.t1REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
Lsat_s103.g0034.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s103.g0035.t1PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
Lsat_s103.g0036.t1TRANSPOSASE-RELATED
Lsat_s103.g0037.t1
Lsat_s103.g0038.t1HILLARIN
Lsat_s103.g0039.t1HILLARIN
Lsat_s103.g0040.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0041.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0042.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0043.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0044.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0045.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0046.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s103.g0047.t1
Lsat_s103.g0048.t1
Lsat_s103.g0049.t1
Lsat_s103.g0050.t1
Lsat_s103.g0051.t1SPHINGOMYELIN PHOSPHODIESTERASE
Lsat_s103.g0052.t1SPHINGOMYELIN PHOSPHODIESTERASE
Lsat_s103.g0053.t1
Lsat_s103.g0054.t1
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