About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s104.g0041.t1CASEIN KINASE-RELATED
Lsat_s104.g0042.t1
Lsat_s104.g0043.t1EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER
Lsat_s104.g0044.t1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
Lsat_s104.g0045.t1KIAA0586 PROTEIN
Lsat_s104.g0046.t1MYELIN TRANSCRIPTION FACTOR 1-RELATED
Lsat_s104.g0047.t1KIAA0586 PROTEIN
Lsat_s104.g0048.t1
Lsat_s104.g0049.t1CLAVATA3/ESR (CLE)-RELATED PROTEIN 7
Lsat_s104.g0050.t1ZINC FINGER PROTEIN
Lsat_s104.g0051.t1
Lsat_s104.g0052.t1DIMETHYLADENOSINE TRANSFERASE
Lsat_s104.g0053.t1
Lsat_s104.g0054.t1HEAT SHOCK PROTEIN 90 FAMILY MEMBER
Lsat_s104.g0055.t1WD REPEAT PROTEIN
Lsat_s104.g0056.t1
Lsat_s104.g0057.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s104.g0058.t1
Lsat_s104.g0059.t1
Lsat_s104.g0060.t1
Lsat_s104.g0061.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s104.g0062.t1
Lsat_s104.g0063.t1
Lsat_s104.g0064.t1WD REPEAT PROTEIN
Lsat_s104.g0065.t1
Lsat_s104.g0066.t1WD REPEAT PROTEIN
Lsat_s104.g0067.t1
Lsat_s105.g0001.t1
Lsat_s105.g0002.t1PEPTIDASE
Lsat_s105.g0003.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s105.g0004.t1
Lsat_s105.g0005.t1PHOSPHOLIPID ACYLTRANSFERASE
Lsat_s105.g0006.t1CHITIN BINDING PERITROPHIN-A
Lsat_s105.g0007.t1
Lsat_s105.g0008.t1
Lsat_s105.g0009.t1
Lsat_s105.g0010.t1
Lsat_s105.g0011.t1SIMILAR TO HYPOTHETICAL PROTEIN FLJ40298
Lsat_s105.g0012.t1
Lsat_s105.g0013.t1
Lsat_s105.g0014.t1
Lsat_s105.g0015.t1HOMEOBOX PROTEIN SIX
Lsat_s105.g0016.t1
Lsat_s105.g0017.t1GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
Lsat_s105.g0018.t1SERINE/THREONINE-PROTEIN KINASE TAO
Lsat_s105.g0019.t1
Lsat_s105.g0020.t1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
Lsat_s105.g0021.t1DIHYDROFOLATE REDUCTASE
Lsat_s105.g0022.t1-
Lsat_s105.g0023.t1
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