Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s106.g0008.t1 | |
Lsat_s106.g0009.t1 | BLR2807 PROTEIN |
Lsat_s106.g0010.t1 | |
Lsat_s106.g0011.t1 | |
Lsat_s106.g0012.t1 | FUKUTIN RELATED PROTEIN |
Lsat_s106.g0013.t1 | RAS GTPASE-ACTIVATING PROTEINS |
Lsat_s106.g0014.t1 | CERAMIDE GLUCOSYLTRANSFERASE |
Lsat_s106.g0015.t1 | AGAP011099-PA |
Lsat_s106.g0016.t1 | |
Lsat_s106.g0017.t1 | SOLUTE CARRIER FAMILY 2 |
Lsat_s106.g0018.t1 | |
Lsat_s106.g0019.t1 | HOMEOBOX PROTEIN, PUTATIVE-RELATED |
Lsat_s106.g0020.t1 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER |
Lsat_s106.g0021.t1 | GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG |
Lsat_s106.g0022.t1 | BTK-BINDING PROTEIN-RELATED |
Lsat_s106.g0023.t1 | |
Lsat_s106.g0024.t1 | |
Lsat_s106.g0025.t1 | |
Lsat_s106.g0026.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s106.g0027.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s106.g0028.t1 | |
Lsat_s106.g0029.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s106.g0030.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s106.g0031.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s106.g0032.t1 | |
Lsat_s106.g0033.t1 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
Lsat_s106.g0034.t1 | |
Lsat_s106.g0035.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0036.t1 | |
Lsat_s106.g0037.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0038.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0039.t1 | |
Lsat_s106.g0040.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0041.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0042.t1 | |
Lsat_s106.g0043.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0044.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0045.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0046.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0047.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s106.g0048.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s106.g0049.t1 | SUPERKILLER 3 PROTEIN-RELATED |
Lsat_s106.g0050.t1 | HELIX LOOP HELIX PROTEIN 21-RELATED |
Lsat_s106.g0051.t1 | JTB PROTEIN-RELATED |
Lsat_s106.g0052.t1 | CYTOCHROME C OXIDASE POLYPEPTIDE |
Lsat_s106.g0053.t1 | BTB/POZ DOMAIN-CONTAINING |
Lsat_s106.g0054.t1 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
Lsat_s106.g0055.t1 | GLUCOSE REPRESSIBLE PROTEIN MAK10 |
Lsat_s106.g0056.t1 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
Lsat_s106.g0057.t1 |