About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s106.g0008.t1
Lsat_s106.g0009.t1BLR2807 PROTEIN
Lsat_s106.g0010.t1
Lsat_s106.g0011.t1
Lsat_s106.g0012.t1FUKUTIN RELATED PROTEIN
Lsat_s106.g0013.t1RAS GTPASE-ACTIVATING PROTEINS
Lsat_s106.g0014.t1CERAMIDE GLUCOSYLTRANSFERASE
Lsat_s106.g0015.t1AGAP011099-PA
Lsat_s106.g0016.t1
Lsat_s106.g0017.t1SOLUTE CARRIER FAMILY 2
Lsat_s106.g0018.t1
Lsat_s106.g0019.t1HOMEOBOX PROTEIN, PUTATIVE-RELATED
Lsat_s106.g0020.t1E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
Lsat_s106.g0021.t1GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG
Lsat_s106.g0022.t1BTK-BINDING PROTEIN-RELATED
Lsat_s106.g0023.t1
Lsat_s106.g0024.t1
Lsat_s106.g0025.t1
Lsat_s106.g0026.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s106.g0027.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s106.g0028.t1
Lsat_s106.g0029.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s106.g0030.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s106.g0031.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s106.g0032.t1
Lsat_s106.g0033.t1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
Lsat_s106.g0034.t1
Lsat_s106.g0035.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0036.t1
Lsat_s106.g0037.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0038.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0039.t1
Lsat_s106.g0040.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0041.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0042.t1
Lsat_s106.g0043.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0044.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0045.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0046.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0047.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s106.g0048.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s106.g0049.t1SUPERKILLER 3 PROTEIN-RELATED
Lsat_s106.g0050.t1HELIX LOOP HELIX PROTEIN 21-RELATED
Lsat_s106.g0051.t1JTB PROTEIN-RELATED
Lsat_s106.g0052.t1CYTOCHROME C OXIDASE POLYPEPTIDE
Lsat_s106.g0053.t1BTB/POZ DOMAIN-CONTAINING
Lsat_s106.g0054.t1POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
Lsat_s106.g0055.t1GLUCOSE REPRESSIBLE PROTEIN MAK10
Lsat_s106.g0056.t1SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1
Lsat_s106.g0057.t1
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