Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s127.g0018.t1 | |
| Lsat_s127.g0019.t1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B'' SUBUNIT GAMMA |
| Lsat_s127.g0020.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
| Lsat_s127.g0021.t1 | MONOCARBOXYLATE TRANSPORTER |
| Lsat_s127.g0022.t1 | |
| Lsat_s127.g0023.t1 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Lsat_s127.g0024.t1 | ZGC:174356 |
| Lsat_s127.g0025.t1 | UNCHARACTERIZED |
| Lsat_s127.g0026.t1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| Lsat_s127.g0027.t1 | TRANSFERASE, PUTATIVE-RELATED |
| Lsat_s127.g0028.t1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Lsat_s127.g0029.t1 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
| Lsat_s127.g0030.t1 | PHD FINGER PROTEIN |
| Lsat_s127.g0031.t1 | POTASSIUM CHANNEL, SUBFAMILY K |
| Lsat_s127.g0032.t1 | GUANYLYL CYCLASE |
| Lsat_s127.g0033.t1 | GUANYLYL CYCLASE |
| Lsat_s128.g0001.t1 | |
| Lsat_s128.g0002.t1 | TOL-PAL SYSTEM PROTEIN TOLA |
| Lsat_s128.g0003.t1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| Lsat_s128.g0004.t1 | |
| Lsat_s128.g0005.t1 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| Lsat_s128.g0006.t1 | LUNG SEVEN TRANSMEMBRANE RECEPTOR |
| Lsat_s128.g0007.t1 | TUMOR ENDOTHELIAL MARKER 7 RELATED |
| Lsat_s128.g0008.t1 | |
| Lsat_s128.g0009.t1 | INNEXIN |
| Lsat_s128.g0010.t1 | CENTROSOMAL PROTEIN 2 |
| Lsat_s128.g0011.t1 | |
| Lsat_s128.g0012.t1 | |
| Lsat_s128.g0013.t1 | |
| Lsat_s128.g0014.t1 | |
| Lsat_s128.g0015.t1 | LATERAL SIGNALING TARGET PROTEIN 2 HOMOLOG |
| Lsat_s128.g0016.t1 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
| Lsat_s128.g0017.t1 | OS01G0585100 PROTEIN |
| Lsat_s128.g0018.t1 | NUCLEAR HORMONE RECEPTOR |
| Lsat_s128.g0019.t1 | |
| Lsat_s128.g0020.t1 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Lsat_s128.g0021.t1 | MUCIN 4-RELATED |
| Lsat_s128.g0022.t1 | |
| Lsat_s128.g0023.t1 | MUCIN 4-RELATED |
| Lsat_s128.g0024.t1 | |
| Lsat_s129.g0001.t1 | |
| Lsat_s129.g0002.t1 | RGD1565685 PROTEIN |
| Lsat_s129.g0003.t1 | |
| Lsat_s129.g0004.t1 | |
| Lsat_s129.g0005.t1 | |
| Lsat_s129.g0006.t1 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
| Lsat_s129.g0007.t1 | |
| Lsat_s129.g0008.t1 | |
| Lsat_s129.g0009.t1 | |
| Lsat_s129.g0010.t1 | SPORE COAT PROTEIN SP85 |
