About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11833ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides11834-
Paelopatides11835AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides11836AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides11837-
Paelopatides11838CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN
Paelopatides11841-
Paelopatides11842LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides11843-
Paelopatides11844FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides11845PROTEIN CBG26694
Paelopatides11846ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides11847-
Paelopatides11850-
Paelopatides11851TRANSPOSON
Paelopatides11852PROTEIN CBG26694
Paelopatides11853PROTEIN CBG26694
Paelopatides11854SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides11855APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides11856SRCR DOMAIN-CONTAINING PROTEIN
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