About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12321B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides12322ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides12323PROTEIN CBG26694
Paelopatides12324CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12325PIKACHURIN-LIKE PROTEIN
Paelopatides12326-
Paelopatides12327TRANSPOSON
Paelopatides12328N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides12329REVERSE TRANSCRIPTASES
Paelopatides12330REVERSE TRANSCRIPTASES
Paelopatides12331G DOMAIN-CONTAINING PROTEIN
Paelopatides12332MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides12333ENDONUCLEASE
Paelopatides12334L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides12335-
Paelopatides12336PROTEIN CBG26694
Paelopatides12339EPM2A-INTERACTING PROTEIN 1
Paelopatides12340LITHOSTATHINE
Paelopatides12341TRANSPOSON
Paelopatides12342-
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