About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12363UNCHARACTERIZED
Paelopatides12364REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12365ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides12366ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides12367ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides12368ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides12369ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12370-
Paelopatides12371PROTEIN CBG26694
Paelopatides12372ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12373CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12374PEROXISOMAL SARCOSINE OXIDASE
Paelopatides12375PROTEIN CBG26694
Paelopatides12376SMALL NUCLEAR RIBONUCLEOPROTEIN
Paelopatides12377-
Paelopatides12378ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12379ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides12380REGULATOR OF CHROMOSOME CONDENSATION
Paelopatides12381-
Paelopatides12382L1 TRANSPOSABLE ELEMENT-RELATED
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