About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12235KINESIN-ASSOCIATED PROTEINS
Paelopatides12236AD-003 - RELATED
Paelopatides12237-
Paelopatides12238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12239-
Paelopatides12240ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides12241-
Paelopatides12242PROTEIN CBG26694
Paelopatides12243ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides12244SH3 DOMAIN-CONTAINING
Paelopatides12245-
Paelopatides12246PROTEIN CBG26694
Paelopatides12247-
Paelopatides12248-
Paelopatides12251PROTEIN CBG26694
Paelopatides12252RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
Paelopatides12253-
Paelopatides12254REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12255REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12256BUCENTAUR RELATED
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