About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12870BUCENTAUR RELATED
Paelopatides12871REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12872PEPTIDASE
Paelopatides12873ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides12874-
Paelopatides12875-
Paelopatides12876-
Paelopatides12877REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12878MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Paelopatides12879PROTEIN CBG26694
Paelopatides12880-
Paelopatides12881-
Paelopatides12882OS09G0542200 PROTEIN
Paelopatides12883ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12884UNCHARACTERIZED
Paelopatides12885REVERSE TRANSCRIPTASES
Paelopatides12886FARNESYL-PYROPHOSPHATE SYNTHETASE
Paelopatides12887TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER
Paelopatides12888PEPTIDASE S8
Paelopatides12889CXC DOMAIN-CONTAINING PROTEIN-RELATED
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