About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12932-
Paelopatides12933PROTEIN CBG23806
Paelopatides12934ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12935-
Paelopatides12936REVERSE TRANSCRIPTASES
Paelopatides12937IMPORTIN-7, 8, 11
Paelopatides12938-
Paelopatides12939-
Paelopatides12940UNCHARACTERIZED
Paelopatides12941REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12942FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12943ENDONUCLEASE-RELATED
Paelopatides12944ENZYMATIC POLYPROTEIN-RELATED
Paelopatides12945TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides12946PARANEOPLASTIC ANTIGEN
Paelopatides12947-
Paelopatides12948MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Paelopatides12950REVERSE TRANSCRIPTASES
Paelopatides12951GAG-RELATED PROTEIN
Paelopatides1295252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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