About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12994REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12995-
Paelopatides12996-
Paelopatides12997PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Paelopatides12998ALZHEIMER'S DISEASE BETA-AMYLOID RELATED
Paelopatides12999ALZHEIMER'S DISEASE BETA-AMYLOID RELATED
Paelopatides13000-
Paelopatides13001RETROTRANSPOSON
Paelopatides13002-
Paelopatides13003-
Paelopatides13004TYROSINE-PROTEIN KINASE
Paelopatides13005TRANSLATION ELONGATION FACTOR G-RELATED
Paelopatides13006REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13007TRANSLATION ELONGATION FACTOR G-RELATED
Paelopatides13008OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Paelopatides13009-
Paelopatides13010-
Paelopatides13011MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides13012MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides13013ZGC:195170
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