The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000072l.254 | COILED-COIL DOMAIN-CONTAINING PROTEIN 105 |
| PMEG.utg000072l.255 | |
| PMEG.utg000072l.256 | |
| PMEG.utg000072l.257 | AMINO ACID TRANSPORTER |
| PMEG.utg000072l.258 | MULTIVESICULAR BODY SUBUNIT 12B |
| PMEG.utg000072l.259 | KINETOCHORE-ASSOCIATED PROTEIN DSN1 HOMOLOG |
| PMEG.utg000072l.26 | |
| PMEG.utg000072l.260 | 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000072l.261 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| PMEG.utg000072l.262 | TNF RECEPTOR ASSOCIATED FACTOR |
| PMEG.utg000072l.263 | RAB GDP/GTP EXCHANGE FACTOR |
| PMEG.utg000072l.265 | |
| PMEG.utg000072l.266 | O-ACYLTRANSFERASE |
| PMEG.utg000072l.267 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
| PMEG.utg000072l.268 | UNCHARACTERIZED |
| PMEG.utg000072l.269 | DYNACTIN 6 |
| PMEG.utg000072l.27 | RIKEN CDNA 4933430I17 GENE |
| PMEG.utg000072l.270 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
| PMEG.utg000072l.271 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
| PMEG.utg000072l.272 | SRCR DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000072l.273 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
| PMEG.utg000072l.274 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| PMEG.utg000072l.275 | ZINC FINGER, ZZ DOMAIN CONTAINING 3 |
| PMEG.utg000072l.276 | |
| PMEG.utg000072l.277 | TRANSCRIPTION FACTOR-LIKE 5 PROTEIN |
| PMEG.utg000072l.278 | BTB/POZ DOMAIN-CONTAINING |
| PMEG.utg000072l.279 | RGPR-RELATED |
| PMEG.utg000072l.28 | SH3 DOMAIN-CONTAINING |
| PMEG.utg000072l.280 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| PMEG.utg000072l.281 | DOPAMINE BETA HYDROXYLASE RELATED |
| PMEG.utg000072l.282 | |
| PMEG.utg000072l.283 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000072l.284 | |
| PMEG.utg000072l.285 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000072l.286 | |
| PMEG.utg000072l.287 | SOLUTE CARRIER FAMILY 5 |
| PMEG.utg000072l.288 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000072l.289 | DOPAMINE BETA HYDROXYLASE RELATED |
| PMEG.utg000072l.29 | COLLAGEN ALPHA |
| PMEG.utg000072l.290 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| PMEG.utg000072l.291 | RAS GTPASE-ACTIVATING PROTEINS |
| PMEG.utg000072l.292 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B |
| PMEG.utg000072l.293 | BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN |
| PMEG.utg000072l.294 | |
| PMEG.utg000072l.295 | FLOTILLIN-RELATED |
| PMEG.utg000072l.296 | AKNA DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000072l.297 | 60S RIBOSOMAL PROTEIN L28 |
| PMEG.utg000072l.298 | |
| PMEG.utg000072l.299 | RADIAL SPOKEHEAD-RELATED |
| PMEG.utg000072l.3 | G9A, ISOFORM B |
