The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000072l.30 | UNCHARACTERIZED |
| PMEG.utg000072l.300 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| PMEG.utg000072l.301 | |
| PMEG.utg000072l.302 | 30S 40S RIBOSOMAL PROTEIN |
| PMEG.utg000072l.303 | |
| PMEG.utg000072l.304 | CRUMBS FAMILY MEMBER |
| PMEG.utg000072l.305 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000072l.306 | CDGSH IRON SULFUR DOMAIN PROTEIN HOMOLOG |
| PMEG.utg000072l.307 | VESICLE PROTEIN SORTING-ASSOCIATED |
| PMEG.utg000072l.308 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| PMEG.utg000072l.309 | |
| PMEG.utg000072l.31 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| PMEG.utg000072l.310 | |
| PMEG.utg000072l.311 | SCHLAFEN |
| PMEG.utg000072l.312 | METALLOPROTEASE TLDD |
| PMEG.utg000072l.313 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| PMEG.utg000072l.314 | PROTEIN FAM78A |
| PMEG.utg000072l.315 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED |
| PMEG.utg000072l.316 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| PMEG.utg000072l.317 | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 |
| PMEG.utg000072l.32 | UNCHARACTERIZED |
| PMEG.utg000072l.33 | SERINE/THREONINE PROTEIN KINASE |
| PMEG.utg000072l.34 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 |
| PMEG.utg000072l.35 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
| PMEG.utg000072l.36 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| PMEG.utg000072l.37 | VALYL-TRNA SYNTHETASES |
| PMEG.utg000072l.38 | |
| PMEG.utg000072l.39 | FI14130P |
| PMEG.utg000072l.40 | ATP-DEPENDENT RNA HELICASE DBP3 |
| PMEG.utg000072l.41 | SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO |
| PMEG.utg000072l.42 | RIBOSOMAL PROTEIN L5-RELATED |
| PMEG.utg000072l.43 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000072l.44 | NETRIN/LAMININ-RELATED |
| PMEG.utg000072l.45 | |
| PMEG.utg000072l.46 | CALCIUM BINDING PROTEINS |
| PMEG.utg000072l.47 | SIDEROFLEXIN |
| PMEG.utg000072l.48 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED |
| PMEG.utg000072l.49 | |
| PMEG.utg000072l.5 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| PMEG.utg000072l.50 | L-CYSTEINE DESULFHYDRASE |
| PMEG.utg000072l.51 | LIM/HOMEOBOX PROTEIN LHX |
| PMEG.utg000072l.52 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000072l.53 | |
| PMEG.utg000072l.54 | HAMARTIN |
| PMEG.utg000072l.55 | |
| PMEG.utg000072l.56 | |
| PMEG.utg000072l.57 | |
| PMEG.utg000072l.58 | CATION-TRANSPORTING ATPASE-RELATED |
| PMEG.utg000072l.59 | 60 KDA RIBONUCLEOPROTEIN SSA/RO |
| PMEG.utg000072l.6 |
