The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000072l.60 | VACUOLAR ATP SYNTHASE SUBUNIT G |
PMEG.utg000072l.61 | DYNAMIN |
PMEG.utg000072l.62 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
PMEG.utg000072l.63 | SPINSTER |
PMEG.utg000072l.64 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000072l.65 | CALICYLIN BINDING PROTEIN |
PMEG.utg000072l.66 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
PMEG.utg000072l.67 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
PMEG.utg000072l.68 | TRANSMEMBRANE PROTEIN 2-RELATED |
PMEG.utg000072l.69 | |
PMEG.utg000072l.7 | TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER |
PMEG.utg000072l.70 | TRANSMEMBRANE PROTEIN 2-RELATED |
PMEG.utg000072l.71 | OUTER DENSE FIBER OF SPERM TAILS 2 |
PMEG.utg000072l.73 | |
PMEG.utg000072l.74 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000072l.75 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
PMEG.utg000072l.76 | RETICULOCALBIN |
PMEG.utg000072l.77 | TRANSCRIPTIONAL ADAPTER 1 |
PMEG.utg000072l.78 | SURFEIT LOCUS PROTEIN |
PMEG.utg000072l.79 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
PMEG.utg000072l.8 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
PMEG.utg000072l.80 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
PMEG.utg000072l.81 | UNCHARACTERIZED |
PMEG.utg000072l.82 | MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED |
PMEG.utg000072l.83 | HEAT SHOCK PROTEIN 70KDA |
PMEG.utg000072l.84 | HEAT SHOCK PROTEIN 70KDA |
PMEG.utg000072l.85 | G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000072l.87 | RAPSYN-RELATED |
PMEG.utg000072l.88 | CDC73 DOMAIN PROTEIN |
PMEG.utg000072l.89 | 6-PHOSPHOGLUCONOLACTONASE |
PMEG.utg000072l.9 | TUBULIN |
PMEG.utg000072l.90 | DELTA-AMINOLEVULINIC ACID DEHYDRATASE |
PMEG.utg000072l.91 | RHOMBOID-RELATED PROTEIN |
PMEG.utg000072l.92 | HOMEO BOX HB9 LIKE A-RELATED |
PMEG.utg000072l.93 | HOMEO BOX HB9 LIKE A-RELATED |
PMEG.utg000072l.94 | HOMEO BOX HB9 LIKE A-RELATED |
PMEG.utg000072l.95 | TYROSINASE FAMILY MEMBER |
PMEG.utg000072l.96 | SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 |
PMEG.utg000072l.97 | NUCLEAR HORMONE RECEPTOR |
PMEG.utg000072l.98 | MYD88 |
PMEG.utg000072l.99 | MYD88 |
PMEG.utg000073l.1 | ATILLA, ISOFORM B-RELATED-RELATED |
PMEG.utg000073l.10 | PROTEIN FAM199X |
PMEG.utg000073l.12 | |
PMEG.utg000073l.13 | |
PMEG.utg000073l.14 | PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED |
PMEG.utg000073l.15 | ROPPORIN-1-LIKE PROTEIN |
PMEG.utg000073l.16 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
PMEG.utg000073l.17 | TETRASPANIN |
PMEG.utg000073l.18 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 |