The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000073l.19 | |
| PMEG.utg000073l.2 | TYROSINE-PROTEIN KINASE BAZ1B |
| PMEG.utg000073l.20 | SULFOTRANSFERASE SULT |
| PMEG.utg000073l.21 | - |
| PMEG.utg000073l.22 | BETA-HEXOSAMINIDASE |
| PMEG.utg000073l.23 | ATP-DEPENDENT RNA HELICASE |
| PMEG.utg000073l.24 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| PMEG.utg000073l.25 | FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE |
| PMEG.utg000073l.26 | LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE |
| PMEG.utg000073l.27 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000073l.28 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000073l.29 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000073l.3 | FLAP ENDONUCLEASE FAMILY MEMBER |
| PMEG.utg000073l.30 | - |
| PMEG.utg000073l.31 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| PMEG.utg000073l.32 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| PMEG.utg000073l.33 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| PMEG.utg000073l.34 | |
| PMEG.utg000073l.35 | |
| PMEG.utg000073l.36 | |
| PMEG.utg000073l.37 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| PMEG.utg000073l.38 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| PMEG.utg000073l.39 | |
| PMEG.utg000073l.4 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| PMEG.utg000073l.40 | POLYCYSTIN FAMILY MEMBER |
| PMEG.utg000073l.41 | |
| PMEG.utg000073l.42 | STIMULATED BY RETINOIC ACID GENE 8 PROTEIN HOMOLOG |
| PMEG.utg000073l.43 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| PMEG.utg000073l.44 | TETRASPANIN |
| PMEG.utg000073l.45 | |
| PMEG.utg000073l.46 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| PMEG.utg000073l.47 | SOLUTE CARRIER FAMILY 17 |
| PMEG.utg000073l.49 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| PMEG.utg000073l.5 | |
| PMEG.utg000073l.50 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| PMEG.utg000073l.51 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
| PMEG.utg000073l.6 | DBX |
| PMEG.utg000073l.7 | GENE, 17359-RELATED |
| PMEG.utg000073l.8 | RAS-LIKE FAMILY MEMBER 11 |
| PMEG.utg000073l.9 | |
| PMEG.utg000075l.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| PMEG.utg000075l.10 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| PMEG.utg000075l.11 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| PMEG.utg000075l.2 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| PMEG.utg000075l.3 | NUCLEAR PORE COMPLEX PROTEIN NUP205 |
| PMEG.utg000075l.4 | SULFOTRANSFERASE SULT |
| PMEG.utg000075l.5 | |
| PMEG.utg000075l.6 | SIALATE O-ACETYLESTERASE |
| PMEG.utg000075l.7 | |
| PMEG.utg000075l.8 | SPLICING FACTOR YJU2 |
